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Protein Overview: spe-9

General Information:
Name(s) found: spe-9 / CE27074 [WormBase]
Description(s) found:
Found 22 descriptions.
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  • WBGene00004963 locus:spe-9 Sperm transmembrane protein 9 status:Confirmed UniProt:Q9TVY6 protein_id:CAB60992.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 661 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    pseudopodium [IDALink to PubMed article]
    plasma membrane [ISSLink to PubMed article]
    cell surface [IDALink to PubMed article]
    membrane-bounded organelle [IDALink to PubMed article]
    Biological Process: single fertilization [IMPLink to PubMed article]
    Molecular Function: calcium ion binding [IEALink to PubMed article]
    receptor binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVILVLVVL FFAGDCAKIR KIIDFLEKDA PNDIEKTPNY NEESLAVKRN KNFNPCLENP  60
   61 KICSNRGKCL HENGNFYCIC PVTHYGKTCE HVSDQTNCEK HLCQNNSTCV SIKSLRTIVN 120
  121 TVLLRQIRVQ RKVNGSKAAL TNEELAEIDL EVNYECICQK GYFGGLCDES EADRTCQEVY 180
  181 CLGRGKGAIN ATGKCECECE NQFFGDRCEQ ISACFDTQCD NGGICEDVVD WKTKTVTATC 240
  241 KCPSAIELIG GTVTGENCET LQIPSTAPKE FIPCAEGSNS TMFFKKFIAN ISLEYMDDIS 300
  301 ELEAIKNDYN DGKNVNGTMT DGWCRNDGKC VPEVVRVNSS RAYYIYRCEC TNPLTDGYYC 360
  361 EYKRHDSCSL TREEVARGDR WDEKCTDSQH GACVDISGVA HCVCKPDYTG EKCEIFDPCA 420
  421 RQPCKHGDCI PIPNTADVAF GTSRYQCLCP LSAKLNPESQ ACMEINEKKC APGACGNGRC 480
  481 VPCESDADDL MPLCNDNDNR QGFRCLCEAG YLPPFCKVHT NPCYQNLCQN SATCHIDPKQ 540
  541 RSYDCQCVNG TRGSLCENVD DSCDAFGNKI CVHGTCINDE YFHRGFSCEC DDGFEGLDCN 600
  601 VEIAWSSVMT NRLMKNYEFS LPLVACFVSL AILLPVIVIS RRRQGRVEEA KKTSEVKTEN 660
  661 P

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..179] PSI-BLAST 17.522879 NMR structure of the human NOTCH-1 ligand binding region
    2 View Details [180..549] PSI-BLAST 9.045757 Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor
    3 View Details [550..661] FFAS03 2.15 No description for 2go59 was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • protein binding
    		•  1.27345206371464 bayes_pls_golite062009
  • binding
    		•  1.17619965960956 bayes_pls_golite062009
  • receptor binding
    		•  0.74474413948438 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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