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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: spe-9
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.94
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVILVLVVL FFAGDCAKIR KIIDFLEKDA PNDIEKTPNY NEESLAVKRN KNFNPCLENP  60
   61 KICSNRGKCL HENGNFYCIC PVTHYGKTCE HVSDQTNCEK HLCQNNSTCV SIKSLRTIVN 120
  121 TVLLRQIRVQ RKVNGSKAAL TNEELAEIDL EVNYECICQK GYFGGLCDES EADRTCQEVY 180
  181 CLGRGKGAIN ATGKCECECE NQFFGDRCEQ ISACFDTQCD NGGICEDVVD WKTKTVTATC 240
  241 KCPSAIELIG GTVTGENCET LQIPSTAPKE FIPCAEGSNS TMFFKKFIAN ISLEYMDDIS 300
  301 ELEAIKNDYN DGKNVNGTMT DGWCRNDGKC VPEVVRVNSS RAYYIYRCEC TNPLTDGYYC 360
  361 EYKRHDSCSL TREEVARGDR WDEKCTDSQH GACVDISGVA HCVCKPDYTG EKCEIFDPCA 420
  421 RQPCKHGDCI PIPNTADVAF GTSRYQCLCP LSAKLNPESQ ACMEINEKKC APGACGNGRC 480
  481 VPCESDADDL MPLCNDNDNR QGFRCLCEAG YLPPFCKVHT NPCYQNLCQN SATCHIDPKQ 540
  541 RSYDCQCVNG TRGSLCENVD DSCDAFGNKI CVHGTCINDE YFHRGFSCEC DDGFEGLDCN 600
  601 VEIAWSSVMT NRLMKNYEFS LPLVACFVSL AILLPVIVIS RRRQGRVEEA KKTSEVKTEN 660
  661 P

YRC Informatics Platform - Version 3.0
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