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Protein Overview: mat-3

General Information:
Name(s) found: mat-3 / CE26888 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00003134 locus:mat-3 status:Partially_confirmed UniProt:Q19294 protein_id:CCD69151.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 673 amino acids

    Gene Ontology:
    Cellular Component: anaphase-promoting complex [IEALink to PubMed article]
    Biological Process: hermaphrodite genitalia development [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    post-embryonic body morphogenesis [IMPLink to PubMed article]
    gamete generation [IMPLink to PubMed article]
    response to stress [IEALink to PubMed article]
    reproduction [IMPLink to PubMed article]
    meiosis [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVSFSTPVQ NSTASRLALI QQAAARSGAL PPAGQYRGSK LSPFDVSQMS GVSISMVERA  60
   61 KINGPEFVEE LEWLRQQTTS RCFLDAEMWT NEILAHLPDK WCAPNTLNLY NQVSELVLDN 120
  121 TRSPMASPAS NSLYAPGEDQ MPTVKRNHTS RFAQSLIKNK EFRRAAFFLE KTMNGNKLDH 180
  181 FLHFRCLFLA YYQEHLENDA EGIERKTSFA EERSPFSLLY QRMEDKKLRE NEDVWFEYLM 240
  241 GLLEVELGLK DLAEKSFRNV VIREPRIWPA WEALSRLIAD IEDADKFVTS AEVKSLWMGD 300
  301 WFMTLVLQRF HQHSMAIQKA EQLVTRGMTG LPMIITKIAA CSNARHDHDQ AISNFEDVRK 360
  361 ADPYRLGDLH LLSDSLYIRN DQKKLSTLAI EVYKVHKFRW ETCCIVANYH AIRRDSEHAI 420
  421 KFFQRALRLN PGLAALWVLI GHEFMEMKNN AAACVSYRRA IEIDPADHRG WYGLGQMYDI 480
  481 MKMPAYALFY YQEAQKCKPH DSRLLVALGD IYSKLNRIED AEKCFTGAYL FGDVEGNALW 540
  541 SLAKLHERYS DDNKAAQAFE VFLVVYELVT SAEEKIIYAI AFLANHFFKI EDFDKASEYA 600
  601 TKCLAFETLC QEGNRLFREI AKIQARESRL PVEEAPGPSN ASAAGGQEAM DTEEAPQEGG 660
  661 EEEMSEGEDD FSF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..110] deduced N/A No confident structure predictions are available.
    2 View Details [111..201] PSI-BLAST 3.154902 Crystal Structure of the Hypothetical protein VPA1032 from Vibrio parahaemolyticus, Northeast Structural Genomics Target VpR44
    3 View Details [202..673] PSI-BLAST 59.69897 The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • ubiquitin-protein ligase activity
    		•  6.63746543212322 bayes_pls_golite062009
  • small conjugating protein ligase activity
    		•  6.37753885031863 bayes_pls_golite062009
  • acid-amino acid ligase activity
    		•  5.68162115570289 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  4.89523122092864 bayes_pls_golite062009
  • binding
    		•  2.57186536498101 bayes_pls_golite062009
  • ligase activity
    		•  1.72049482453565 bayes_pls_golite062009
  • protein binding
    		•  1.65083457326273 bayes_pls_golite062009
  • hydrolase activity
    		•  0.619711232527193 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.41706917101675 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.194719472400022 bayes_pls_golite062009
  • DNA binding
    		•  0.17736976899009 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.68

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle