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Protein Overview: cpin-1

General Information:
Name(s) found: cpin-1 / CE26624 [WormBase]
Description(s) found:
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  • WBGene00000775 locus:cpin-1 status:Confirmed UniProt:Q20166 protein_id:CAA92772.2 [WormBase]
  • gi|17540282|ref|NP_501669.1| CyPIN (guanine aminohydrolase) homolog) family member (cpin-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|13548397|emb|CAA92772.2| C. elegans protein F38E11.3, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE26624 WBGene00000775 locus:cpi-1 status:Partially_confirmed TR:Q20166 protein_id:CAA92772.2 [wormpep150.fasta]
  • 26624 WBGene00000775 locus:cpi-1 status:Partially_confirmed TR:Q20166 protein_id:CAA92772.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • CyPIn, guanine aminohydrolase homolog (cpi-1) [Caenorhabditis elegans]gi|13548397|emb|CAA92772.2| Hypothetical protein F38E11.3 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • locus:cpi-1 status:Partially_confirmed TR:Q20166 protein_id:CAA92772.2 [wormpep115.fasta.reversed]
  • CE26624 locus:cpi-1 status:Predicted TR:Q20166 protein_id:CAA92772.2 [wormpep80.hongbin]
  • CE26624 WBGene00000775 locus:cpin-1 status:Partially_confirmed UniProt:Q20166_CAEEL protein_id:CAA92772.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE26624 WBGene00000775 locus:cpin-1 status:Partially_confirmed UniProt:Q20166_CAEEL protein_id:CAA92772.2| [wormORF-contam.fasta]
  • CE26624 WBGene00000775 locus:cpin-1 status:Partially_confirmed TR:Q20166 protein_id:CAA92772.2 [wormpep160-contam.fasta]
  • Hypothetical protein F38E11.3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CyPIN (guanine aminohydrolase) homolog) family member (cpin-1) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE26624 WBGene00000775 locus:cpin-1 status:Partially_confirmed UniProt:Q20166 protein_id:CAA92772.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE26624 WBGene00000775 locus:cpin-1 status:Confirmed UniProt:Q20166 protein_id:CAA92772.2 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CyPIN (Guanine aminohydrolase) homolog OS=Caenorhabditis elegans GN=cpin-1 PE=1 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 424 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    Biological Process: histidine catabolic process to glutamate and formamide [IEALink to PubMed article]
    Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides [IEALink to PubMed article]
    hydrolase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIRGKTIHV KYAWIDGKIE ENVSISVDET GKIVGINKKI FDENVHLSNH VLLPGFINTH  60
   61 SHAFHRHLRG KSEIGKSAAD TFWKWRDNMY GLVAEVTKEK IYQYCLSTFK EMINAGITTV 120
  121 GEFHYVHHSE QKFDLDQLVI QAAIDAGIRI VLLQTLYERA GFDSPAVHPV QERFIASYED 180
  181 FIGNLEKLRK EKTHERVQIG VAAHSARAVP FENIKKLFEY ASEHKIPFHI HLEEQPKEIF 240
  241 DCQKFIGQKQ GPSDLILSKM HLNEYFTAVH STFTPANNML LFSKLGANVS ICPCTEGYLG 300
  301 DGIPRINESL KISFGTDCNN RICFLEEMRW ACFSQQMLNN SRSVCGLSPE KLLLCATIDG 360
  361 ARALSLTSKT GSLEVGKYFD AISFSLDSPL LENSLADTLI DSLVLSAGNR EISNVFVSGV 420
  421 DRKT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..424] PSI-BLAST 52.69897 The Crystal Structure of a Novel, Latent Dihydroorotase from Aquifex aeolicus at 1.7 A resolution

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity
    		•  3.06979421893431 bayes_pls_golite062009
  • catalytic activity
    		•  1.70199291046899 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  1.60895003474033 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
    		•  0.787370269329878 bayes_pls_golite062009
  • binding
    		•  0.771164376899668 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.629962267754185 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
    		•  0.573107361273483 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.506159010274668 bayes_pls_golite062009
  • DNA binding
    		•  0.462348875991261 bayes_pls_golite062009
  • peptidase activity
    		•  0.370872229900721 bayes_pls_golite062009
  • deaminase activity
    		•  0.0589623696103007 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle