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Protein Overview: CE26163

General Information:
Name(s) found: CE26163 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00021800 status:Confirmed UniProt:Q9N3H3 protein_id:CCD72292.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 431 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: nematode larval development [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    extracellular polysaccharide biosynthetic process [IEALink to PubMed article]
    regulation of nitrogen utilization [IEALink to PubMed article]
    steroid biosynthetic process [IEALink to PubMed article]
    cellular metabolic process [IEALink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: 3-beta-hydroxy-delta5-steroid dehydrogenase activity [IEALink to PubMed article]
    coenzyme binding [IEALink to PubMed article]
    catalytic activity [IEALink to PubMed article]
    steroid delta-isomerase activity [IEALink to PubMed article]
    transcription repressor activity [IEALink to PubMed article]
    dTDP-4-dehydrorhamnose reductase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSVLGRSGL GARQAVSVVG SQNFSSAVTS AENAHPEPRV SSQSAQFRKG AGGRASFSGN  60
   61 VVTVFGASGF LGLPVVNKFA KNGSQIIIPY RQDPYYMREH KVLGELGQVL YFPFELMDEE 120
  121 SIRKAVKYSN VVINLIGTRV PTGKYNYYDV NDTGARRLAR ICKEMGVEKF VHLSALGATT 180
  181 QPQKGHFVAK SQFLHSKGLG EVAVREEFPE ATIIRPSVIY GELDGFIQYY VSRWRKTPLD 240
  241 YVYLYKKGEE TYKMPIWVGD VAAGIQSAVN DPTAKGHTYE FVGPHCYQLS ELIDFMYKKA 300
  301 HCLSDFGFRY KRHGMPDPYF MALTMATELY GKVFKCKVPL NREWMEFVEV QSDILTGERT 360
  361 LADLGVRRLT EFELAGGQQA FYRSFNRYFE EQYGELPAPS LPLRSPPLTK KNTGRGATGI 420
  421 KSETSKNVAF N

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..431] PSI-BLAST 72.0 dTDP-glucose 4,6-dehydratase (RmlB)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor
    		•  8.29933408515789 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  7.95797278304506 bayes_pls_golite062009
  • oxidoreductase activity
    		•  6.99432781333161 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  3.24660140528789 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  2.70133031193062 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors
    		•  2.63737732090553 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  2.6095138085648 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  2.55467700009568 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.38954645656667 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  2.13774251017711 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  2.04161745256941 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  1.96417104841008 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.91557560670782 bayes_pls_golite062009
  • catalytic activity
    		•  1.79741889688267 bayes_pls_golite062009
  • alcohol dehydrogenase (NAD) activity
    		•  1.27032644348698 bayes_pls_golite062009
  • kinase activity
    		•  0.411492042144505 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.407724015989551 bayes_pls_golite062009
  • protein kinase activity
    		•  0.367600236406166 bayes_pls_golite062009
  • binding
    		•  0.355184540089764 bayes_pls_golite062009
  • NAD or NADH binding
    		•  0.33908018537574 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.28434566828041 bayes_pls_golite062009
  • protein serine/threonine kinase activity
    		•  0.0954335766234867 bayes_pls_golite062009
  • coenzyme binding
    		•  0.0812901552017963 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.37

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle