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Protein Overview: rme-1

General Information:
Name(s) found: rme-1 / CE25148 [WormBase]
Description(s) found:
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  • WBGene00004373 locus:rme-1 status:Confirmed UniProt:G5EEU7 protein_id:CCD72160.1 [WormBase]
  • gi|7206821|gb|AAF39980.1| Receptor mediated endocytosis protein 1, isoform c [Caenorhabditis elegans] [NCBI NR]
  • gi|72000900|ref|NP_001024194.1| Receptor Mediated Endocytosis family member (rme-1) [Caenorhabditis elegans] [NCBI NR]
  • ref|NP_504590.1| receptor Mediated Endocytosis RME-1, required for endocytic recycling (66.8 kD) (rme-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|13487779|gb|AAK27716.1|AF357878_1 receptor-mediated endocytosis 1 isoform I [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE25148 WBGene00004373 locus:rme-1 status:Confirmed TR:Q9N5B9 protein_id:AAF39980.1 [wormpep150.fasta]
  • 25148 WBGene00004373 locus:rme-1 status:Confirmed TR:Q9N5B9 protein_id:AAF39980.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • receptor Mediated Endocytosis RME-1, required for endocytic recycling (66.8 kD) (rme-1) [Caenorhabditis elegans]gi|7206821|gb|AAF39980.1| Receptor mediated endocytosis protein 1, isoform c [Caenorhabditis elegans]gi|13487779|gb|AAK27716.1| receptor-medi [nrdb_11152004_Chlamydomonas]
  • locus:rme-1 status:Confirmed TR:Q9N5B9 protein_id:AAF39980.1 [wormpep115.fasta.reversed]
  • CE25148 locus:rme-1 status:Confirmed [wormpep80.hongbin]
  • CE25148 WBGene00004373 locus:rme-1 status:Confirmed UniProt:Q9N5B9_CAEEL protein_id:AAF39980.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE25148 WBGene00004373 locus:rme-1 status:Confirmed UniProt:Q9N5B9_CAEEL protein_id:AAF39980.1| [wormORF-contam.fasta]
  • Receptor Mediated Endocytosis family member (rme-1) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • receptor-mediated endocytosis 1 isoform I [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Receptor mediated endocytosis protein 1, isoform c [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE25148 WBGene00004373 locus:rme-1 status:Confirmed UniProt:Q9N5B9 protein_id:AAF39980.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE25148 WBGene00004373 locus:rme-1 status:Confirmed UniProt:G5EEU7 protein_id:CCD72160.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Isoform of G5ECC3, Receptor Mediated Endocytosis OS=Caenorhabditis elegans GN=rme-1 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 589 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    endomembrane system [IDALink to PubMed article]
    intracellular [IEALink to PubMed article]
    Biological Process: receptor-mediated endocytosis [IMPLink to PubMed article]
    Molecular Function: GTP binding [IEALink to PubMed article]
    protein binding [TASLink to PubMed article]
    GTPase activity [IEALink to PubMed article]
    calcium ion binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYNFFRTVPR ANRNEITFYP DYEEEGQKKK KTRSMFSWLG GDSSKKKNKE VLETVSEGLR  60
   61 KIYKQKLLPL EEFHKFHDFH SPALDDPDFD AKPMILLVGQ YSTGKTTFIR YLLESDFPGI 120
  121 RIGPEPTTDR FIAVMHGDEE GSIPGNALVV DAKKQFRALS GFGNAFLNRF QCSTLPNQVL 180
  181 ESVTIVDTPG ILSGEKQRID RGYDFTGVLE WFAERVDRII LLFDAHKLDI SDEFKRCIEA 240
  241 LAGNEDKIRI VLNKSDMVDH QQLMRVYGAL MWSLGKVFKT PEVSRVYLGS FWDHPLHYDL 300
  301 NRRLFQDEQH DLFQDLQALP RNAALRKLND LIKRARLAKV HAYIIAELRK QMPSMIGKDK 360
  361 KKKDLIQNLD KIYEQLQREH NISPGDFPDV NKMREKLQTQ DFSKFNPLKP KLLEVVDGML 420
  421 ATDIARLMAQ IPKEEAAAPA GSNGSADPTV RGGAFSQTTE AETPFGFGRG EGFDKGADEA 480
  481 EWVVSRERTT ADSTFESLGP VNGYLSGRAA KEHMVKSKLP NSVLGKVWKL ADIDKDGQLD 540
  541 ADEFALANYL INLKLEGHEI PSELPKHLIP PSKRGEQDPV YPSLNDNDE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..589] PSI-BLAST 101.0 No description for 2qptA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle