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Protein Overview: rme-1

General Information:
Name(s) found: rme-1 / CE25146 [WormBase]
Description(s) found:
Found 16 descriptions.
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  • WBGene00004373 locus:rme-1 status:Confirmed UniProt:Q9N5B7 protein_id:CCD72158.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 786 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    endomembrane system [IDALink to PubMed article]
    intracellular [IEALink to PubMed article]
    Biological Process: receptor-mediated endocytosis [IMPLink to PubMed article]
    Molecular Function: GTP binding [IEALink to PubMed article]
    protein binding [TASLink to PubMed article]
    GTPase activity [IEALink to PubMed article]
    calcium ion binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESVNSEEHK INEAPAPPVI VINSSTKEEQ EATQTDRIEG QMKKIDSVFD EQNVASLEGV  60
   61 NSKNEISGSV SSSSFEELNA ETEDLSERSE VEKDEDLGRV VEEHKEPAQV PVESETPETS 120
  121 KKEIHQEEEI SELEKVPETV EEEIEVVNTS VEITEVKKEV IEEVKISGLK EEETPVPKMR 180
  181 AQQQVPVAAD RPIRRLSIAR ASMMTPKASP KLAKYMEPVR EEGQKKKKTR SMFSWLGGDS 240
  241 SKKKNKEVLE TVSEGLRKIY KQKLLPLEEF HKFHDFHSPA LDDPDFDAKP MILLVGQYST 300
  301 GKTTFIRYLL ESDFPGIRIG PEPTTDRFIA VMHGDEEGSI PGNALVVDAK KQFRALSGFG 360
  361 NAFLNRFQCS TLPNQVLESV TIVDTPGILS GEKQRIDRGY DFTGVLEWFA ERVDRIILLF 420
  421 DAHKLDISDE FKRCIEALAG NEDKIRIVLN KSDMVDHQQL MRVYGALMWS LGKVFKTPEV 480
  481 SRVYLGSFWD HPLHYDLNRR LFQDEQHDLF QDLQALPRNA ALRKLNDLIK RARLAKVHAY 540
  541 IIAELRKQMP SMIGKDKKKK DLIQNLDKIY EQLQREHNIS PGDFPDVNKM REKLQTQDFS 600
  601 KFNPLKPKLL EVVDGMLATD IARLMAQIPK EEAAAPAGSN GSADPTVRGG AFSQTTEAET 660
  661 PFGFGRGEGF DKGADEAEWV VSRERTTADS TFESLGPVNG YLSGRAAKEH MVKSKLPNSV 720
  721 LGKVWKLADI DKDGQLDADE FALANYLINL KLEGHEIPSE LPKHLIPPSK RGEQDPVYPS 780
  781 LNDNDE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..223] PSI-BLAST 3.69897 Heavy meromyosin subfragment
    2 View Details [224..786] PSI-BLAST 1000.0 No description for 2qptA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle