| Protein: | rme-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 786 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rme-1.
| Description | E-value | Query Range |
Subject Range |
|
|
764.0 | [0..210] | [772..149] |
|
Region A: Residues: [1-223] |
1 11 21 31 41 51
| | | | | |
1 MESVNSEEHK INEAPAPPVI VINSSTKEEQ EATQTDRIEG QMKKIDSVFD EQNVASLEGV 60
61 NSKNEISGSV SSSSFEELNA ETEDLSERSE VEKDEDLGRV VEEHKEPAQV PVESETPETS 120
121 KKEIHQEEEI SELEKVPETV EEEIEVVNTS VEITEVKKEV IEEVKISGLK EEETPVPKMR 180
181 AQQQVPVAAD RPIRRLSIAR ASMMTPKASP KLAKYMEPVR EEG
|
| Detection Method: |  |
| Confidence: | 3.69897 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [224-786] |
1 11 21 31 41 51
| | | | | |
1 QKKKKTRSMF SWLGGDSSKK KNKEVLETVS EGLRKIYKQK LLPLEEFHKF HDFHSPALDD 60
61 PDFDAKPMIL LVGQYSTGKT TFIRYLLESD FPGIRIGPEP TTDRFIAVMH GDEEGSIPGN 120
121 ALVVDAKKQF RALSGFGNAF LNRFQCSTLP NQVLESVTIV DTPGILSGEK QRIDRGYDFT 180
181 GVLEWFAERV DRIILLFDAH KLDISDEFKR CIEALAGNED KIRIVLNKSD MVDHQQLMRV 240
241 YGALMWSLGK VFKTPEVSRV YLGSFWDHPL HYDLNRRLFQ DEQHDLFQDL QALPRNAALR 300
301 KLNDLIKRAR LAKVHAYIIA ELRKQMPSMI GKDKKKKDLI QNLDKIYEQL QREHNISPGD 360
361 FPDVNKMREK LQTQDFSKFN PLKPKLLEVV DGMLATDIAR LMAQIPKEEA AAPAGSNGSA 420
421 DPTVRGGAFS QTTEAETPFG FGRGEGFDKG ADEAEWVVSR ERTTADSTFE SLGPVNGYLS 480
481 GRAAKEHMVK SKLPNSVLGK VWKLADIDKD GQLDADEFAL ANYLINLKLE GHEIPSELPK 540
541 HLIPPSKRGE QDPVYPSLND NDE
|
| Detection Method: | |
| Confidence: | 1000.0 |
| Match: | 2qptA |
| Description: | No description for 2qptA was found. |
