Protein Overview: CE23773

General Information:
Name(s) found:	CE23773 [WormBase]
Description(s) found: SHOW ONLY BEST	WBGene00018919 status:Predicted UniProt:Q9N5Q9 protein_id:CCD62320.1 [WormBase] gi\|7206690\|gb\|AAF39849.1\| Hypothetical protein F56A4.11 [Caenorhabditis elegans] [NCBI NR] gi\|17561500\|ref\|NP_503679.1\| hypothetical protein F56A4.11 [Caenorhabditis elegans] [NCBI NR] [wormpep67.fasta] CE23773 WBGene00018919 status:Predicted TR:Q9N5Q9 protein_id:AAF39849.1 [wormpep150.fasta] 23773 WBGene00018919 status:Predicted TR:Q9N5Q9 protein_id:AAF39849.1 [wormpep130-phg-ecoli-orf-rand.fasta] predicted CDS, putative protein family member, with at least 17 transmembrane domains, of ancient origin (5C948) [Caenorhabditis elegans]gi\|7206690\|gb\|AAF39849.1\| Hypothetical protein F56A4.11 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas] status:Predicted TR:Q9N5Q9 protein_id:AAF39849.1 [wormpep115.fasta.reversed] CE23773 status:Predicted TR:Q9N5Q9 protein_id:AAF39849.1 [wormpep80.hongbin] CE23773 WBGene00018919 status:Predicted UniProt:Q9N5Q9_CAEEL protein_id:AAF39849.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta] CE23773 WBGene00018919 status:Predicted UniProt:Q9N5Q9_CAEEL protein_id:AAF39849.1\| [wormORF-contam.fasta] Hypothetical protein F56A4.11 [Caenorhabditis elegans] [nr-271106-contam.fasta] F56A4.11 [Caenorhabditis elegans] [nr-271106-contam.fasta] CE23773 WBGene00018919 status:Predicted UniProt:Q9N5Q9 protein_id:AAF39849.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta] [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr] CE23773 WBGene00018919 status:Predicted UniProt:Q9N5Q9 protein_id:CCD62320.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
Organism:	Caenorhabditis elegans
Length:	746 amino acids
Gene Ontology:
Cellular Component:	integral to membrane [IEA]
Biological Process:	inorganic anion transport [IEA] drug transport [IEA] phosphate transport [IEA] transport [IEA]
Molecular Function:	inorganic anion transmembrane transporter activity [IEA] phosphate transmembrane transporter activity [IEA] transporter activity [IEA] drug transmembrane transporter activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFDYKVHST LPHIPKTPSF AFWNRTRIYI MVLTLACLTF IQINTVIFNF TVICMEDIVE  60
   61 DYNLLTNYTG TPSTKALALS PTAHCSRRCA GPRVTTAVVG GRGTRGVRVS HFGTHWFQRT 120
  121 TEKSLLFSGA AIGGLIGLIP SVPLINSIGL RNFQTISGLI SALGALLFPL AVSIDFYSSF 180
  181 LCRVLQGMGS SIIFTSVGVV PGVWAPSNET NTFTAILSCA LQLGNIICMP VSGFLCESSL 240
  241 GWRSIYYLFG GLTAIIFIMF WFTYTDDPKL HRLTEIQILK IHFFGKNVSE NCEVHPTTSD 300
  301 GRLPKIRKTS SFVFWNKTRM FIMILTLACL TFIQINTLLF NFTVICMEDV VENYNLLTNY 360
  361 TATHWFQRNT EKSLLFSGVA IGGLIGLIPS VPLINALGLR NVQTISGLIS AFGALLFPLA 420
  421 VSIGFYTTLL CRILQGMGSA VMFTSVGVVP NVWAPRNEAN TFMAILSCAL QLSNIICMPV 480
  481 SGLLCESALG WRSIYYLFGG LTFIMFIVFW ISYKDDPKMY RKRNLKKSPA AKLSRYLAIC 540
  541 TDPTVLITWI TCFGGFVGLY SLSLYGPTYL REILKFDVRE TGFLSALPFI LSAIIKFAAG 600
  601 KISDKLSFLS EKSRFVFFAA TSQIGFVAGL LVMAFTTNRL IAQIAFNFAI VSSGMNVMGV 660
  661 FKVVQLRCLQ HVHFAIAVIS FTTYLVQFLA PVIVGIICPD NTPAQWTTLF LVISAIIIVC 720
  721 TVGFPFLTKS DAADYTKKKT VESCRS

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

Term	Confidence	Notes
substrate-specific transmembrane transporter activity	5.17122575244927	bayes_pls_golite062009
ion transmembrane transporter activity	4.40082803797762	bayes_pls_golite062009
cation transmembrane transporter activity	4.15136138921997	bayes_pls_golite062009
transporter activity	3.82096685159505	bayes_pls_golite062009
anion transmembrane transporter activity	3.72315344358443	bayes_pls_golite062009
transmembrane transporter activity	3.34396155292818	bayes_pls_golite062009
substrate-specific transporter activity	3.32643461660963	bayes_pls_golite062009
inorganic anion transmembrane transporter activity	2.38147400623282	bayes_pls_golite062009
phosphate transmembrane transporter activity	1.55146182911318	bayes_pls_golite062009
active transmembrane transporter activity	1.46819549608723	bayes_pls_golite062009
binding	1.278768212932	bayes_pls_golite062009
secondary active transmembrane transporter activity	0.869150152038001	bayes_pls_golite062009
alcohol transmembrane transporter activity	0.339747214378126	bayes_pls_golite062009
polyol transmembrane transporter activity	0.339747214378126	bayes_pls_golite062009
solute:cation symporter activity	0.327558013224678	bayes_pls_golite062009
symporter activity	0.327558013224678	bayes_pls_golite062009
glycerol transmembrane transporter activity	0.222664452597504	bayes_pls_golite062009

Term	Confidence	Notes
substrate-specific transmembrane transporter activity	5.46247398538901	bayes_pls_golite062009
ion transmembrane transporter activity	4.58978526526921	bayes_pls_golite062009
cation transmembrane transporter activity	4.31967711223954	bayes_pls_golite062009
transporter activity	4.09176719149278	bayes_pls_golite062009
anion transmembrane transporter activity	3.94605227012838	bayes_pls_golite062009
substrate-specific transporter activity	3.59744164024479	bayes_pls_golite062009
transmembrane transporter activity	3.5865018981083	bayes_pls_golite062009
inorganic anion transmembrane transporter activity	2.52916479889426	bayes_pls_golite062009
phosphate transmembrane transporter activity	1.78662033436109	bayes_pls_golite062009
active transmembrane transporter activity	1.59419818573076	bayes_pls_golite062009
binding	1.26757615356623	bayes_pls_golite062009
secondary active transmembrane transporter activity	1.22264637452409	bayes_pls_golite062009
polyol transmembrane transporter activity	0.924836669821548	bayes_pls_golite062009
alcohol transmembrane transporter activity	0.924836669821548	bayes_pls_golite062009
glycerol transmembrane transporter activity	0.812001619402678	bayes_pls_golite062009
solute:cation symporter activity	0.74591237387473	bayes_pls_golite062009
symporter activity	0.74591237387473	bayes_pls_golite062009
cation:sugar symporter activity	0.143419068761182	bayes_pls_golite062009
sugar:hydrogen symporter activity	0.143419068761182	bayes_pls_golite062009

Source: Reynolds et al. 2008. Manuscript submitted

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..319]	FFAS03	6.05	Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
2	View Details	[320..746]	PSI-BLAST	40.045757	Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

Protein Overview: CE23773

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: