YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE20354

General Information:
Name(s) found: CE20354 [WormBase]
Description(s) found:
Found 18 descriptions.
SHOW ALL
  • WBGene00022200 locus:fard-1 status:Partially_confirmed UniProt:Q9TZL9 protein_id:CCD71597.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 536 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: steroid biosynthetic process [IEALink to PubMed article]
    Molecular Function: 3-beta-hydroxy-delta5-steroid dehydrogenase activity [IEALink to PubMed article]
    steroid delta-isomerase activity [IEALink to PubMed article]
    L-aminoadipate-semialdehyde dehydrogenase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFSVRDVYA GSSVLLTGGT GFLGKVIVEK LLWTIDDIQN IYLMIRTRKG KNPQERLSGL  60
   61 LHDPLFNRIR QEKPEAFDKL KAIGGDMMVE NLGMDPEDVM LIRDNVNVVI HSAATVKFDE 120
  121 HLRAAVTMNV IGTKRIIDLC HQIKDLKVLV HVSTAYANCD RFETTEKIYK SPMAPQKLVD 180
  181 ALSWMDDETL TKITPKILGL RPNTYTLTKA LAESTIETEA KDIPVIIIRP SIVGAMWQGP 240
  241 LPGWTDNING PTGIFAAVGR GVLTNMCGSS ESKADIIPVD IVANMIIASA SYRTSINTTE 300
  301 IPVIHCSSGE LNPLYWGHIV LFLEQFYKKY PMEQCFAVPS TYFHKSRSLF LINYYIKHHI 360
  361 PAAISDISAR LIGKRKNNVK LYSKVWKMIE TLHFFTTRGW SFNARGLPEF FEKMTPADQK 420
  421 EYNFDVRQVD WNSYLFDYVM GIKKFLLKEN LENLNRSRAH LLKMRIRRQV IAAIVYAGFI 480
  481 STIGRKWKKT TQYLTWFGAM LATYTYTEVS FRRHIPLKSL KDYTQTSDYS RYLQKS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..449] PSI-BLAST 69.0 dTDP-glucose 4,6-dehydratase (RmlB)
    2 View Details [450..536] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 3-hydroxyacyl-CoA dehydrogenase activity
    		•  2.04225907952394 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors
    		•  2.03461533859253 bayes_pls_golite062009
  • catalytic activity
    		•  1.79741889688267 bayes_pls_golite062009
  • oxidoreductase activity
    		•  1.69771604880532 bayes_pls_golite062009
  • fatty acid synthase activity
    		•  1.23679054027553 bayes_pls_golite062009
  • 3-oxoacyl-[acyl-carrier-protein] reductase activity
    		•  0.604742541607263 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  0.418775403210681 bayes_pls_golite062009
  • binding
    		•  0.405786564527334 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  0.32207755075663 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.42

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle