| Protein: | CE20354 |
| Organism: | Caenorhabditis elegans |
| Length: | 536 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE20354.
| Description | E-value | Query Range |
Subject Range |
|
|
387.0 | [0..1] | [536..1] |
|
Region A: Residues: [1-449] |
1 11 21 31 41 51
| | | | | |
1 MAFSVRDVYA GSSVLLTGGT GFLGKVIVEK LLWTIDDIQN IYLMIRTRKG KNPQERLSGL 60
61 LHDPLFNRIR QEKPEAFDKL KAIGGDMMVE NLGMDPEDVM LIRDNVNVVI HSAATVKFDE 120
121 HLRAAVTMNV IGTKRIIDLC HQIKDLKVLV HVSTAYANCD RFETTEKIYK SPMAPQKLVD 180
181 ALSWMDDETL TKITPKILGL RPNTYTLTKA LAESTIETEA KDIPVIIIRP SIVGAMWQGP 240
241 LPGWTDNING PTGIFAAVGR GVLTNMCGSS ESKADIIPVD IVANMIIASA SYRTSINTTE 300
301 IPVIHCSSGE LNPLYWGHIV LFLEQFYKKY PMEQCFAVPS TYFHKSRSLF LINYYIKHHI 360
361 PAAISDISAR LIGKRKNNVK LYSKVWKMIE TLHFFTTRGW SFNARGLPEF FEKMTPADQK 420
421 EYNFDVRQVD WNSYLFDYVM GIKKFLLKE
|
| Detection Method: |  |
| Confidence: | 69.0 |
| Match: | 1g1aA |
| Description: | dTDP-glucose 4,6-dehydratase (RmlB) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| 3-hydroxyacyl-CoA dehydrogenase activity | 2.04225907952394 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-CH group of donors | 2.03461533859253 | bayes_pls_golite062009 |
| catalytic activity | 1.79741889688267 | bayes_pls_golite062009 |
| oxidoreductase activity | 1.69771604880532 | bayes_pls_golite062009 |
| fatty acid synthase activity | 1.23679054027553 | bayes_pls_golite062009 |
| 3-oxoacyl-[acyl-carrier-protein] reductase activity | 0.604742541607263 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on CH-OH group of donors | 0.418775403210681 | bayes_pls_golite062009 |
| binding | 0.405786564527334 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 0.32207755075663 | bayes_pls_golite062009 |
|
Region A: Residues: [450-536] |
1 11 21 31 41 51
| | | | | |
1 NLENLNRSRA HLLKMRIRRQ VIAAIVYAGF ISTIGRKWKK TTQYLTWFGA MLATYTYTEV 60
61 SFRRHIPLKS LKDYTQTSDY SRYLQKS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
