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Protein Overview: CE19979

General Information:
Name(s) found: CE19979 [WormBase]
Description(s) found:
Found 20 descriptions.
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  • WBGene00010587 locus:sol-2 status:Confirmed UniProt:Q9XUU2 protein_id:CAB04576.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 436 amino acids

    Gene Ontology:
    Cellular Component: extracellular region [IEALink to PubMed article]
    Biological Process: complement activation [IEALink to PubMed article]
    Molecular Function: serine-type endopeptidase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIEYLLFIII NVITLITCSY CPIKHIHSST PTTGFIESPG YPSAFSAPLD CIFNITTAAS  60
   61 NVIQLSFVSF DLASKNQLSD QCLDSYLLVV VVDRHGRQHV GERLCGNQVP LSINTMQSWM 120
  121 QVQFVTTSTN QKHRGFRIQY RILSEAAIQE PSSTLGESMF SGCGGHSTPG QLSGEILSPG 180
  181 YPTTYPKNST CNWLIRVEAR QRIYIRIVHL HLAPTIAECE RASLTIIDGY KHEKYGIDRK 240
  241 ESTSETSEAK FCGSQLYYAE EGMKSYLSSA NRIVVRFITQ EGPPSSMIGE ERIGFKVVWT 300
  301 AVEGLIGEGD ESVNGNSCKD QFMCHGGQVC VEQGHGICAS RSRLCIHSSL VCDGIHNCVE 360
  361 GDFSDEQHCY SREIITSAAL GFSLIVLTML VLVCCDQFRK RRRLRVMIRE RRAASENGKC 420
  421 KNMNNNSITT RIQPNR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..292] PSI-BLAST 25.39794 Mannose-binding protein associated serine protease 2, MASP2
    2 View Details [293..436] PSI-BLAST 23.09691 Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.286076792172079 bayes_pls_golite062009
  • protein binding
    		•  0.14494900666454 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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