YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE19979
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIEYLLFIII NVITLITCSY CPIKHIHSST PTTGFIESPG YPSAFSAPLD CIFNITTAAS  60
   61 NVIQLSFVSF DLASKNQLSD QCLDSYLLVV VVDRHGRQHV GERLCGNQVP LSINTMQSWM 120
  121 QVQFVTTSTN QKHRGFRIQY RILSEAAIQE PSSTLGESMF SGCGGHSTPG QLSGEILSPG 180
  181 YPTTYPKNST CNWLIRVEAR QRIYIRIVHL HLAPTIAECE RASLTIIDGY KHEKYGIDRK 240
  241 ESTSETSEAK FCGSQLYYAE EGMKSYLSSA NRIVVRFITQ EGPPSSMIGE ERIGFKVVWT 300
  301 AVEGLIGEGD ESVNGNSCKD QFMCHGGQVC VEQGHGICAS RSRLCIHSSL VCDGIHNCVE 360
  361 GDFSDEQHCY SREIITSAAL GFSLIVLTML VLVCCDQFRK RRRLRVMIRE RRAASENGKC 420
  421 KNMNNNSITT RIQPNR

Type	Start	End	Confidence
Non-Cytoplasmic	1	373	0.96
Transmembrane Helix	374	395	0.91
Cytoplasmic	396	436	0.95