| Protein: | CE19979 |
| Organism: | Caenorhabditis elegans |
| Length: | 436 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE19979.
| Description | E-value | Query Range |
Subject Range |
|
|
228.0 | [0..5] | [418..965] |
|
Region A: Residues: [1-292] |
1 11 21 31 41 51
| | | | | |
1 MIEYLLFIII NVITLITCSY CPIKHIHSST PTTGFIESPG YPSAFSAPLD CIFNITTAAS 60
61 NVIQLSFVSF DLASKNQLSD QCLDSYLLVV VVDRHGRQHV GERLCGNQVP LSINTMQSWM 120
121 QVQFVTTSTN QKHRGFRIQY RILSEAAIQE PSSTLGESMF SGCGGHSTPG QLSGEILSPG 180
181 YPTTYPKNST CNWLIRVEAR QRIYIRIVHL HLAPTIAECE RASLTIIDGY KHEKYGIDRK 240
241 ESTSETSEAK FCGSQLYYAE EGMKSYLSSA NRIVVRFITQ EGPPSSMIGE ER
|
| Detection Method: |  |
| Confidence: | 25.39794 |
| Match: | 1nt0A |
| Description: | Mannose-binding protein associated serine protease 2, MASP2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.286076792172079 | bayes_pls_golite062009 |
| protein binding | 0.14494900666454 | bayes_pls_golite062009 |
|
Region A: Residues: [293-436] |
1 11 21 31 41 51
| | | | | |
1 IGFKVVWTAV EGLIGEGDES VNGNSCKDQF MCHGGQVCVE QGHGICASRS RLCIHSSLVC 60
61 DGIHNCVEGD FSDEQHCYSR EIITSAALGF SLIVLTMLVL VCCDQFRKRR RLRVMIRERR 120
121 AASENGKCKN MNNNSITTRI QPNR
|
| Detection Method: | |
| Confidence: | 23.09691 |
| Match: | 1n7dA |
| Description: | Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor |
Matching Structure (courtesy of the PDB): |
|
