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Protein Overview: pat-4

General Information:
Name(s) found: pat-4 / CE19706 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00003931 locus:pat-4 status:Confirmed UniProt:Q9TZC4 protein_id:CCD66066.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 466 amino acids

    Gene Ontology:
    Cellular Component: adherens junction [IDALink to PubMed article]
    integrin complex [IDALink to PubMed article]
    Biological Process: embryonic development [IMPLink to PubMed article]
    myofibril assembly [IMPLink to PubMed article]
    integrin-mediated signaling pathway [IGILink to PubMed article]
    locomotory behavior [IMPLink to PubMed articleLink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    locomotion [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    post-embryonic body morphogenesis [IMPLink to PubMed article]
    protein amino acid phosphorylation [IEALink to PubMed article][ISSLink to PubMed article]
    reproduction [IMPLink to PubMed articleLink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: ATP binding [IEALink to PubMed article]
    protein tyrosine kinase activity [IEALink to PubMed article]
    integrin binding [TASLink to PubMed article]
    protein kinase activity [IEALink to PubMed article]
    protein serine/threonine kinase activity [IEALink to PubMed article][ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSTHYHAH KPNVPIIMED VFGWVREGNA FQVRVWLDDH EHDLNVGDDH AFSLLHWAAK  60
   61 GGHVAIAEML LSRGARVNST NMGDDTSLHL AAAHGHRQIV VKLLSRKADV NATNEHGMTP 120
  121 LHYACFWGYE QIAEDLISCG AAVNVCNKKG MTPLDVCQPM CKNTILEIAQ EHGQSPNDRV 180
  181 PFKDTTWKGT KSRTRDATLS RYTGVDVSSL NLITKIAESH SGELWRGKWQ GNDIVARILN 240
  241 VQEVTARISR DFQTEFPALR IFAHPNICAV LAAANQPPNL VIISQYMPFG SLYNVLHEQS 300
  301 SVVIDHGQAV RFALDIARGM SYLHSLDPML LRFYLSSKHV VVDEELTAKL SMADTKFSFQ 360
  361 EVGKAYSPAW MSPEALSRAP EDLNIRAADM WSFAILLWEL NTREVPFSDL PPMECGMKIA 420
  421 LEGLRVHIPP GIARNMNRLM NICMNEDPGR RPNFDQIIPI LERMIL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..73] PSI-BLAST 41.0 Ankyrin-R
    2 View Details [74..466] PSI-BLAST 31.39794 No description for 2j0jA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle