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Protein Overview: ast-1

General Information:
Name(s) found: ast-1 / CE19576 [WormBase]
Description(s) found:
Found 22 descriptions.
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  • WBGene00020368 locus:ast-1 status:Confirmed UniProt:Q22355 protein_id:CCD73307.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 377 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: regulation of transcription, DNA-dependent [IEALink to PubMed article]
    Molecular Function: transcription factor activity [IEALink to PubMed article]
    sequence-specific DNA binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVVSSATLP PTVASADLAI VGGRSSDEDV IKYSAIQTIK QEQQQQQQQQ SNTALPSYNF  60
   61 PFFNGMQNDF PPNRMLYNDN TMQKSENDHF TGMNLSTSAS SSGNSTSSKD QSRRQFYTES 120
  121 SNSSGNGAAA TSGSNGSSSS TESKSDVFNI SMNAFAATPG SKSEDHNIPS FNMLSSYYTG 180
  181 ALKLSNSTSF ANPDPYQILG PTSKNLAHSG SGQTQLWQFL LELLSDKRYS EVITWEGTQG 240
  241 EFKLVDPDEV ARKWGERKSK PNMNYDKMSR ALRYYYDKNI MAKVHGKRYA YKFDFQGIAQ 300
  301 ALQPPTASHP QDYFNSHAMG RIAPDFSSWT SANYRSLNIA GFNNGSTIFN PSVNYSAFGA 360
  361 TGTSNNLSAA RAFPLYR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..183] MSA 14.135996 View MSA. No confident structure predictions are available.
    2 View Details [184..377] PSI-BLAST 40.221849 Fli-1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.75235002882976 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.40837731591833 bayes_pls_golite062009
  • DNA binding
    		•  1.24351754120608 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.06033428483031 bayes_pls_golite062009
  • transcription factor activity
    		•  0.76402352618699 bayes_pls_golite062009
  • protein binding
    		•  0.058151715836892 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle