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Protein Overview: CE19541

General Information:
Name(s) found: CE19541 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00019778 status:Partially_confirmed UniProt:Q9TYY0 protein_id:CCD61351.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 580 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: locomotory behavior [IMPLink to PubMed articleLink to PubMed article]
    cell death [IMPLink to PubMed article]
    morphogenesis of an epithelium [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    protein amino acid prenylation [IEALink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: protein prenyltransferase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHFVKKVPTT EEEKAAKQKE HTKRSQQFLH VRDKIVAKRE KGEYDDEILS LTQAILEKNA  60
   61 DIYTFWNIRR TTIELRMEAN EKVQQSADAE EEEKTKSSQK IENLLAGELF LSYECIKSNP 120
  121 KSYSAWYQRA WALQRQSAPD FKKELALCEK ALQLDCRNFH CWDHRRIVAR MAKRSEAEEL 180
  181 EFSNKLINDN FSNYSAWHYR SIALKNIHRD EKTGAPKIDD ELIASELQKV KNAFFMDAED 240
  241 QSAWTYTRWL LEVGSGKEFL RPESHTPIEL ISASFHGNNT TLVFSRAVTI QFLLTFVDTE 300
  301 NTTGWRAFSS TSPNPTSSRV WQYLSDTPLR VVTSNPTDLE NISWTELNEQ PYVNLDRLKT 360
  361 IYDVVEVPQP AYIGELLEDC KQLIELEPKN KWPLYMRTLV LLEYQPIKSY EEIIKNLENL 420
  421 SENLDPKRSE LYKSLISRQN LNFSIREQFE RILGPDTDWL TCRYSKLTSL EGVEYLAGFV 480
  481 GSADFSGNRL KEIQRIVLPN LKSLTINENP IESLPPSPCL SHLTFFSIAG TQIASVSAVM 540
  541 PFFQTIPSLD RLVFCETPLV EKTEELRAQL PGVRLIPHWL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..580] PSI-BLAST 40.522879 Rab geranylgeranyltransferase alpha-subunit, N-terminal domain; Rab geranylgeranyltransferase alpha-subunit, insert domain; Rab geranylgeranyltransferase alpha-subunit, C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • Rab geranylgeranyltransferase activity
    		•  13.555288199339 bayes_pls_golite062009
  • protein prenyltransferase activity
    		•  12.9872042326453 bayes_pls_golite062009
  • protein geranylgeranyltransferase activity
    		•  12.5639792024732 bayes_pls_golite062009
  • prenyltransferase activity
    		•  10.9012508257439 bayes_pls_golite062009
  • protein farnesyltransferase activity
    		•  5.75066035906508 bayes_pls_golite062009
  • CAAX-protein geranylgeranyltransferase activity
    		•  3.82151622786875 bayes_pls_golite062009
  • binding
    		•  1.23313855731605 bayes_pls_golite062009
  • protein binding
    		•  0.646159692466759 bayes_pls_golite062009
  • G-protein coupled receptor activity
    		•  0.35956081133111 bayes_pls_golite062009
  • receptor activity
    		•  0.269916678721535 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.59

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle