| Protein: | CE19541 |
| Organism: | Caenorhabditis elegans |
| Length: | 580 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE19541.
| Description | E-value | Query Range |
Subject Range |
|
|
210.0 | [0..2] | [315..330] |
|
Region A: Residues: [1-580] |
1 11 21 31 41 51
| | | | | |
1 MHFVKKVPTT EEEKAAKQKE HTKRSQQFLH VRDKIVAKRE KGEYDDEILS LTQAILEKNA 60
61 DIYTFWNIRR TTIELRMEAN EKVQQSADAE EEEKTKSSQK IENLLAGELF LSYECIKSNP 120
121 KSYSAWYQRA WALQRQSAPD FKKELALCEK ALQLDCRNFH CWDHRRIVAR MAKRSEAEEL 180
181 EFSNKLINDN FSNYSAWHYR SIALKNIHRD EKTGAPKIDD ELIASELQKV KNAFFMDAED 240
241 QSAWTYTRWL LEVGSGKEFL RPESHTPIEL ISASFHGNNT TLVFSRAVTI QFLLTFVDTE 300
301 NTTGWRAFSS TSPNPTSSRV WQYLSDTPLR VVTSNPTDLE NISWTELNEQ PYVNLDRLKT 360
361 IYDVVEVPQP AYIGELLEDC KQLIELEPKN KWPLYMRTLV LLEYQPIKSY EEIIKNLENL 420
421 SENLDPKRSE LYKSLISRQN LNFSIREQFE RILGPDTDWL TCRYSKLTSL EGVEYLAGFV 480
481 GSADFSGNRL KEIQRIVLPN LKSLTINENP IESLPPSPCL SHLTFFSIAG TQIASVSAVM 540
541 PFFQTIPSLD RLVFCETPLV EKTEELRAQL PGVRLIPHWL
|
| Detection Method: |  |
| Confidence: | 40.522879 |
| Match: | 1dceA |
| Description: | Rab geranylgeranyltransferase alpha-subunit, N-terminal domain; Rab geranylgeranyltransferase alpha-subunit, insert domain; Rab geranylgeranyltransferase alpha-subunit, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| Rab geranylgeranyltransferase activity | 13.555288199339 | bayes_pls_golite062009 |
| protein prenyltransferase activity | 12.9872042326453 | bayes_pls_golite062009 |
| protein geranylgeranyltransferase activity | 12.5639792024732 | bayes_pls_golite062009 |
| prenyltransferase activity | 10.9012508257439 | bayes_pls_golite062009 |
| protein farnesyltransferase activity | 5.75066035906508 | bayes_pls_golite062009 |
| CAAX-protein geranylgeranyltransferase activity | 3.82151622786875 | bayes_pls_golite062009 |
| binding | 1.23313855731605 | bayes_pls_golite062009 |
| protein binding | 0.646159692466759 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 0.35956081133111 | bayes_pls_golite062009 |
| receptor activity | 0.269916678721535 | bayes_pls_golite062009 |
