Protein Overview: abcf-2

General Information:
Name(s) found:	abcf-2 / CE18971 [WormBase]
Description(s) found: SHOW ONLY BEST	WBGene00012097 locus:abcf-2 status:Confirmed UniProt:G5EFG4 protein_id:CAB04880.1 [WormBase] pir\|\|T25377 hypothetical protein T27E9.7 - Caenorhabditis elegans [NCBI NR] gi\|3881299\|emb\|CAA21772.1\| C. elegans protein T27E9.7, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR] gi\|3880282\|emb\|CAB04880.1\| C. elegans protein T27E9.7, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR] gi\|17555318\|ref\|NP_499779.1\| ABC transporter, class F family member (abcf-2) [Caenorhabditis elegans] [NCBI NR] [wormpep67.fasta] CE18971 WBGene00012097 ABC transporters (2 domains) status:Confirmed TR:Q9XTD9 protein_id:CAA21772.1 [wormpep150.fasta] 18971 WBGene00012097 ABC transporters (2 domains) status:Confirmed TR:Q9XTD9 protein_id:CAA21772.1 [wormpep130-phg-ecoli-orf-rand.fasta] ATP-binding cassette sub-family F member 2 like (70.4 kD) (3O548) [Caenorhabditis elegans]gi\|3880282\|emb\|CAB04880.1\| Hypothetical protein T27E9.7 [Caenorhabditis elegans]gi\|3881299\|emb\|CAA21772.1\| Hypothetical protein T27E9.7 [Caenorhabditis elegans]gi [nrdb_11152004_Chlamydomonas] ABC transporters (2 domains) status:Confirmed TR:Q9XTD9 protein_id:CAA21772.1 [wormpep115.fasta.reversed] CE18971 ABC transporters (2 domains) status:Confirmed TR:Q9XTD9 protein_id:CAA21772.1 [wormpep80.hongbin] CE18971 WBGene00012097 locus:abcf-2 ABC transporters (2 domains) status:Confirmed UniProt:Q9XTD9_CAEEL protein_id:CAB04880.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta] CE18971 WBGene00012097 locus:abcf-2 ABC transporters (2 domains) status:Confirmed UniProt:Q9XTD9_CAEEL protein_id:CAB04880.1\| [wormORF-contam.fasta] Hypothetical protein T27E9.7 [Caenorhabditis elegans] [nr-271106-contam.fasta] T27E9.7 [Caenorhabditis elegans] [nr-271106-contam.fasta] CE18971 WBGene00012097 locus:abcf-2 ABC transporters (2 domains) status:Confirmed TR:Q9XTD9 protein_id:CAA21772.1 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta] CE18971 WBGene00012097 locus:abcf-2 ABC transporters (2 domains) status:Confirmed UniProt:Q9XTD9 protein_id:CAB04880.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta] [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr] CE18971 WBGene00012097 locus:abcf-2 ABC transporters (2 domains) status:Confirmed UniProt:G5EFG4 protein_id:CAB04880.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta] CE18971 WBGene00012097 locus:abcf-2 status:Confirmed UniProt:G5EFG4 protein_id:CAB04880.1 [wormpep246-ecoli-contam.fasta] ABC transporter, class F OS=Caenorhabditis elegans GN=abcf-2 PE=1 SV=1 [CAEEL.fasta.20160308]
Organism:	Caenorhabditis elegans
Length:	622 amino acids
Gene Ontology:
Cellular Component:	Gram-negative-bacterium-type cell wall [IEA] membrane [IEA] integral to membrane [IEA] outer membrane-bounded periplasmic space [IEA]
Biological Process:	cell division [IEA] cobalt ion transport [IEA] D-methionine transport [IEA] phosphate transport [IEA] protein transport [IEA] nitrate transport [IEA] phosphonate transport [IEA] polyamine transport [IEA] cytochrome complex assembly [IEA] transport [IEA] amino acid transport [IEA] nodulation [IEA]
Molecular Function:	ATPase activity [IEA] phosphate transmembrane transporter activity [IEA] ATPase activity, coupled to transmembrane movement of substances [IEA] nitrate transmembrane transporter activity [IEA] amino acid transmembrane transporter activity [IEA] cysteine-type peptidase activity [IEA] transporter activity [IEA] nucleotide binding [IEA] D-methionine transmembrane transporter activity [IEA] ATP binding [IEA] inorganic phosphate transmembrane transporter activity [IEA] nucleoside-triphosphatase activity [IEA] polyamine-transporting ATPase activity [IEA] phosphonate transmembrane-transporting ATPase activity [IEA] toxin transporter activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSDAKKARE AAKKAAAKGG KGKKKVETPT AMSSQHPSVN SLCCLDEELD QAAATLAKIE  60
   61 LENAAARSVA GSLTSDPKGL DHRVESLTIT FHGREIVVDT KLELNRGRRY GLIGLNGSGK 120
  121 STIIQAIYNK EMPIPESVDM YLVSREMPAS EKTALQAVVD VDSVRKELEH LAEQLASQTD 180
  181 EESQDKLMDV YERLDEMDAS LAEKKAAEIL HGLGFTKTMQ MKKCKDFSGG WRMRIALARA 240
  241 LFLKPSVLLL DEPTNHLDLE ACVWLEEELA QYKRTLLVVS HSQDFMNGVC TNIIHLFQKQ 300
  301 LVYYGGNYDQ FVKTRLELLE NQQKRYNWEQ SQLQHMKDYV ARFGHGSAKL ARQAQSKEKT 360
  361 MAKMIAGGLA EKAVTETVKQ FYFFDAGEIP PPVIMVQHVS FRYNENTPWI YKDIDFGIDL 420
  421 DTRIALVGPN GAGKSTLLKL LCTDVMPTDG LIRRHSHCKI GRYHQHLHEE LPLDLSALEF 480
  481 MMKEFPDVKE KEEMRKIVGR YGITGREQVC PMKQLSDGQR CRVSFAWLAW QQPHLLLLDE 540
  541 PTNHLDMESI DALAEAINCF PGGMILVSHD FRLVSQVAEE VWVCDNQGIL KWDGDIFSFK 600
  601 EHLRKQIDKD VRSREKGVVK ER

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

The following runs contain data for this protein:

	BAIT	COMMENTS	PUBLICATION
View Run	hcp-2	hcp2 ip from december	Cheeseman, I.M., et al. (2005)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..80]	PSI-BLAST	44.0	No description for 2hydA was found.
2	View Details	[81..514]	PSI-BLAST	51.69897	No description for 2iw3A was found.
3	View Details	[515..622]	PSI-BLAST	36.045757	No description for 2nq2C was found.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: abcf-2

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: