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Protein Overview: end-1

General Information:
Name(s) found: end-1 / CE18784 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00001310 locus:end-1 status:Partially_confirmed UniProt:G5EDN4 protein_id:CAB04513.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 221 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: endodermal cell fate determination [IDALink to PubMed article]
    regulation of transcription, DNA-dependent [IEALink to PubMed article]
    Molecular Function: DNA binding [IDALink to PubMed article]
    transcription factor activity [IEALink to PubMed article]
    zinc ion binding [IEALink to PubMed article]
    sequence-specific DNA binding [IEALink to PubMed article]
    transcription activator activity [IDALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYQSSSSSPS PHLPYTYGVI DKDGNVHSHE MHFPDNHGNP SPLDATQMYQ QAPVQYGGGD  60
   61 QYFDDFGQYF VQSYDPAQQS TPVHPMFGSL DMMNCYSQQY PQIGQDYQQQ EIENIPPVST 120
  121 NRKIVNKKPS TFHTNSVCSN PNCRTRETTL WRRTDSGAIE CNGCSLYFRK NGIQRPAELC 180
  181 RKTIMKRNRR PRAEVQSPTP EDSKLCHNTT PLQNIPSQHF S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..128] MSA 10.227996 View MSA. No confident structure predictions are available.
    2 View Details [129..221] PSI-BLAST 18.522879 Erythroid transcription factor GATA-1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.18770607371139 bayes_pls_golite062009
  • protein binding
    		•  0.699012253331291 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.1367607837242 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle