| Protein: | end-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 221 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for end-1.
| Description | E-value | Query Range |
Subject Range |
|
|
146.0 | [0..2] | [206..22] |
|
|
142.0 | [0..66] | [211..48] |
|
|
140.0 | [0..2] | [196..83] |
|
|
139.0 | [0..12] | [221..203] |
|
|
139.0 | [0..14] | [202..1] |
|
|
135.0 | [0..86] | [195..1] |
|
Region A: Residues: [1-128] |
1 11 21 31 41 51
| | | | | |
1 MYQSSSSSPS PHLPYTYGVI DKDGNVHSHE MHFPDNHGNP SPLDATQMYQ QAPVQYGGGD 60
61 QYFDDFGQYF VQSYDPAQQS TPVHPMFGSL DMMNCYSQQY PQIGQDYQQQ EIENIPPVST 120
121 NRKIVNKK
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [129-221] |
1 11 21 31 41 51
| | | | | |
1 PSTFHTNSVC SNPNCRTRET TLWRRTDSGA IECNGCSLYF RKNGIQRPAE LCRKTIMKRN 60
61 RRPRAEVQSP TPEDSKLCHN TTPLQNIPSQ HFS
|
| Detection Method: | |
| Confidence: | 18.522879 |
| Match: | 2gatA |
| Description: | Erythroid transcription factor GATA-1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.18770607371139 | bayes_pls_golite062009 |
| protein binding | 0.699012253331291 | bayes_pls_golite062009 |
| transcription regulator activity | 0.1367607837242 | bayes_pls_golite062009 |
