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Protein Overview: rpt-5

General Information:
Name(s) found: rpt-5 / CE17915 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00004505 locus:rpt-5 status:Confirmed UniProt:O76371 protein_id:CCD62966.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 430 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    cytoplasm [IEALink to PubMed article]
    membrane [IEALink to PubMed article]
    Biological Process: embryonic cleavage [IMPLink to PubMed articleLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    protein catabolic process [IEALink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    reproduction [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    Molecular Function: nucleotide binding [IEALink to PubMed article]
    ATPase activity [IEALink to PubMed article]
    ATP binding [IEALink to PubMed article]
    nucleoside-triphosphatase activity [IEALink to PubMed article]
    metalloendopeptidase activity [IEALink to PubMed article]
    hydrolase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQTPPPKDG KNPEAMEVED AIDEEILKMS TEDLKSRTHL LDNEIRIMRS EVQRINHSAT  60
   61 TLKERIKENT ERIKVNKTLP YLVSNVVELL DLEDNTEEEG ANVDLDAQKT KCAVIKTSTR 120
  121 ATYFLPVVGL VDPDELKPGD LVGVNKDSYL ILEKLPAEYD SRVKAMEVDE RPTEQYSDIG 180
  181 GCDKQIQELI EAVVLPMTHK DRFVNLGIHP PKGVLMYGPP GTGKTMMARA VAAQTKSTFL 240
  241 KLAGPQLVQM FIGDGAKLVR DAFALAKEKA PAIIFIDELD AIGTKRFDSE KAGDREVQRT 300
  301 MLELLNQLDG FQPNDDIKVI AATNRIDVLD PALLRSGRLD RKIELPHPNE DARARIMQIH 360
  361 SRKMNVNKDV NFEELARCTD DFNGAQCKAV CVEAGMIALR RDATEILHED FMDAILEVQA 420
  421 KKKASLNYYA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..430] PSI-BLAST 88.0 VCP/p97


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle