| Protein: | rpt-5 |
| Organism: | Caenorhabditis elegans |
| Length: | 430 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rpt-5.
| Description | E-value | Query Range |
Subject Range |
|
|
346.0 | [0..13] | [429..289] |
|
Region A: Residues: [1-430] |
1 11 21 31 41 51
| | | | | |
1 MSQTPPPKDG KNPEAMEVED AIDEEILKMS TEDLKSRTHL LDNEIRIMRS EVQRINHSAT 60
61 TLKERIKENT ERIKVNKTLP YLVSNVVELL DLEDNTEEEG ANVDLDAQKT KCAVIKTSTR 120
121 ATYFLPVVGL VDPDELKPGD LVGVNKDSYL ILEKLPAEYD SRVKAMEVDE RPTEQYSDIG 180
181 GCDKQIQELI EAVVLPMTHK DRFVNLGIHP PKGVLMYGPP GTGKTMMARA VAAQTKSTFL 240
241 KLAGPQLVQM FIGDGAKLVR DAFALAKEKA PAIIFIDELD AIGTKRFDSE KAGDREVQRT 300
301 MLELLNQLDG FQPNDDIKVI AATNRIDVLD PALLRSGRLD RKIELPHPNE DARARIMQIH 360
361 SRKMNVNKDV NFEELARCTD DFNGAQCKAV CVEAGMIALR RDATEILHED FMDAILEVQA 420
421 KKKASLNYYA
|
| Detection Method: |  |
| Confidence: | 88.0 |
| Match: | 1oz4A |
| Description: | VCP/p97 |
Matching Structure (courtesy of the PDB): |
|
