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Protein Overview: ceh-48

General Information:
Name(s) found: ceh-48 / CE16869 [WormBase]
Description(s) found:
Found 22 descriptions.
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  • WBGene00015934 locus:ceh-48 status:Confirmed UniProt:O45080 protein_id:CCD64998.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 459 amino acids

    Gene Ontology:
    Cellular Component: proton-transporting two-sector ATPase complex [IEALink to PubMed article]
    nucleus [IEALink to PubMed article]
    Biological Process: regulation of transcription, DNA-dependent [IEALink to PubMed article]
    ATP synthesis coupled proton transport [IEALink to PubMed article]
    Molecular Function: ATP binding [IEALink to PubMed article]
    DNA binding [IEALink to PubMed article]
    transcription factor activity [IEALink to PubMed article]
    proton-transporting ATPase activity, rotational mechanism [IEALink to PubMed article]
    sequence-specific DNA binding [IEALink to PubMed article]
    hydrogen ion transporting ATP synthase activity, rotational mechanism [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDALTDSGSD PLLSAALGSP IHHAILSMDD EVDGNCDDVD DISPESHHDN HFIDFTDDLV  60
   61 VQTERNLSKK GRTSNRNARQ GYDNYATLTN LQPLPPISTV TSKSTKVQRP SPSPNFYFPT 120
  121 SSNSSYDMKY EEEEDDCEGI THSSSSPSDF SNHGTDLNHP FSASSFDSFD VTTVSTTATS 180
  181 TIMNSTDKFI ARIQEADSTT KSPKGTSPAA LMHGHCEEDF DDGEELNTKE LALQIAAELK 240
  241 RYSIPQAIFA ERVLCRSQGT LSDLLRNPKP WSKLKSGRET FRRMAKWLEE PEFQRMSALR 300
  301 LAACKRKEEH TTPNSPQMVV PKKTRLVFSD IQRRTLQAIF RETKRPSREM QITISQQLNL 360
  361 DPTTVANFFM NARRRGHDLK QETSESEERS EEPSIHFEHS ASSSSASSSS SSSMQLDNYI 420
  421 CDINTINILE EPSPEPREIK YSMQLLENEL DFPANILEP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..75] deduced N/A No confident structure predictions are available.
    2 View Details [76..184] MSA 3.759995 View MSA. No confident structure predictions are available.
    3 View Details [185..390] PSI-BLAST 20.0 No description for 2d5vA was found.
    4 View Details [391..459] PSI-BLAST 5.154902 Solution structure of the second CUT domain of human SATB2

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • binding
    		•  0.971797124886045 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.74904610690468 bayes_pls_golite062009
  • DNA binding
    		•  0.73457854282882 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle