| Protein: | ceh-48 |
| Organism: | Caenorhabditis elegans |
| Length: | 459 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ceh-48.
| Description | E-value | Query Range |
Subject Range |
|
|
143.0 | [0..1] | [390..1] |
|
Region A: Residues: [1-75] |
1 11 21 31 41 51
| | | | | |
1 MDALTDSGSD PLLSAALGSP IHHAILSMDD EVDGNCDDVD DISPESHHDN HFIDFTDDLV 60
61 VQTERNLSKK GRTSN
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [76-184] |
1 11 21 31 41 51
| | | | | |
1 RNARQGYDNY ATLTNLQPLP PISTVTSKST KVQRPSPSPN FYFPTSSNSS YDMKYEEEED 60
61 DCEGITHSSS SPSDFSNHGT DLNHPFSASS FDSFDVTTVS TTATSTIMN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [185-390] |
1 11 21 31 41 51
| | | | | |
1 STDKFIARIQ EADSTTKSPK GTSPAALMHG HCEEDFDDGE ELNTKELALQ IAAELKRYSI 60
61 PQAIFAERVL CRSQGTLSDL LRNPKPWSKL KSGRETFRRM AKWLEEPEFQ RMSALRLAAC 120
121 KRKEEHTTPN SPQMVVPKKT RLVFSDIQRR TLQAIFRETK RPSREMQITI SQQLNLDPTT 180
181 VANFFMNARR RGHDLKQETS ESEERS
|
| Detection Method: | |
| Confidence: | 20.0 |
| Match: | 2d5vA |
| Description: | No description for 2d5vA was found. |
|
Region A: Residues: [391-459] |
1 11 21 31 41 51
| | | | | |
1 EEPSIHFEHS ASSSSASSSS SSSMQLDNYI CDINTINILE EPSPEPREIK YSMQLLENEL 60
61 DFPANILEP
|
| Detection Method: | |
| Confidence: | 5.154902 |
| Match: | 2csfA |
| Description: | Solution structure of the second CUT domain of human SATB2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.971797124886045 | bayes_pls_golite062009 |
| nucleic acid binding | 0.74904610690468 | bayes_pls_golite062009 |
| DNA binding | 0.73457854282882 | bayes_pls_golite062009 |
