Protein Overview: ivd-1

General Information:
Name(s) found:	ivd-1 / CE16798 [WormBase]
Description(s) found: Found 22 descriptions. SHOW ALL	WBGene00015326 locus:ivd-1 status:Confirmed UniProt:G5EEH6 protein_id:CCD61163.1 [WormBase]
Organism:	Caenorhabditis elegans
Length:	419 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	electron transport [IEA]
Molecular Function:	acyl-CoA dehydrogenase activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSALASKLFA KCAAGGRALQ SQAVRQFSAY PIDDSMFGLN DEEIALRQSI RQFADKELAP  60
   61 YADKIDKDNG WDQLRPFWKK LGDQGLLGIT APAEYGGSGM NYFSHVIAME ELSRAAGGIA 120
  121 LSYGAHSNLC INQIVRNGSE EQRKKYLPKL ISGEHMGALA MSEAQAGSDV VSMKLRAEKK 180
  181 GDKYVLNGTK FWITNGPDAD VLVVYAKTDP SKHQHGITCF LVEKNTPGFS QSPKLDKLGM 240
  241 RGSNTCELVF DNCEIHESQI MGGKGKGVYV LMTGLDYERL VLSGGPLGLM QAACDIAFDY 300
  301 AHQRTAFGQK IGSFQLLQGK LADMYTTLNA SRSYLYMVAK AADKGNVSNK DCAGVILYVA 360
  361 EKCTQVCLDA IQILGGNGYI NDYPAGRLLR DAKLYEIGAG TSEVRRLIIG RALNKEYSN

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..419]	PSI-BLAST	123.0	Isovaleryl-CoA dehydrogenase, C-domain; Isovaleryl-coa dehydrogenase, NM domains

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
acyl-CoA oxidase activity	7.01556556997719	bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors	6.78589465598787	bayes_pls_golite062009
general RNA polymerase II transcription factor activity	5.78129971677842	bayes_pls_golite062009
acyl-CoA dehydrogenase activity	5.1762698535957	bayes_pls_golite062009
isovaleryl-CoA dehydrogenase activity	4.66102768687662	bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor	3.75267948370939	bayes_pls_golite062009
RNA polymerase II transcription mediator activity	3.58504058273727	bayes_pls_golite062009
oxidoreductase activity	2.88983847563931	bayes_pls_golite062009
transcription regulator activity	2.31681514717218	bayes_pls_golite062009
pristanoyl-CoA oxidase activity	2.26651221125135	bayes_pls_golite062009
binding	1.84962038137824	bayes_pls_golite062009
catalytic activity	1.79436687732784	bayes_pls_golite062009
palmitoyl-CoA oxidase activity	1.72613267428428	bayes_pls_golite062009
long-chain-acyl-CoA dehydrogenase activity	1.53039234278399	bayes_pls_golite062009
RNA polymerase II transcription factor activity	0.634990683062526	bayes_pls_golite062009
butyryl-CoA dehydrogenase activity	0.400090490265931	bayes_pls_golite062009
protein binding	0.0853302624128481	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

[View Details]

Source: Reynolds et al. 2008. Manuscript submitted

Philius confidence legend

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