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Protein Overview: cmd-1

General Information:
Name(s) found: cmd-1 / CE13902 [WormBase]
Description(s) found:
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  • WBGene00000552 locus:cmd-1 Calmodulin status:Confirmed UniProt:O16305 protein_id:CCD69969.1 [WormBase]
  • pir||T31737 hypothetical protein T21H3.3 - Caenorhabditis elegans [NCBI NR]
  • gi|55976211|sp|O16305.3|CALM_CAEEL RecName: Full=Calmodulin; Short=CaM [NCBI NR]
  • gi|4160167|emb|CAA10601.1| calmodulin [Caenorhabditis elegans] [NCBI NR]
  • gi|29726960|pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin [NCBI NR]
  • gi|2291247|gb|AAB65364.1| Calmodulin protein 1 [Caenorhabditis elegans] [NCBI NR]
  • gi|17564542|ref|NP_503386.1| CalModulin family member (cmd-1) [Caenorhabditis elegans] [NCBI NR]
  • Calmodulin OS=Caenorhabditis elegans GN=cmd-1 PE=1 SV=3 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE13902 WBGene00000552 locus:cmd-1 calmodulin status:Confirmed SW:O16305 protein_id:AAB65364.1 [wormpep150.fasta]
  • 13902 WBGene00000552 locus:cmd-1 calmodulin status:Confirmed TR:O16305 protein_id:AAB65364.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • calmodulin (16.8 kD) (cmd-1) [Caenorhabditis elegans]gi|2291247|gb|AAB65364.1| Calmodulin protein 1 [Caenorhabditis elegans]gi|29726960|pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulingi|39588502|emb|CAE58025.1| Hypothetic [nrdb_11152004_Chlamydomonas]
  • CE13902 WBGene00000552 locus:cmd-1 calmodulin status:Confirmed TR:O16305 protein_id:AAB65364.1 [wormpep132.fasta]
  • 13902 WBGene00000552 locus:cmd-1 calmodulin status:Confirmed SW:O16305 protein_id:AAB65364.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • locus:cmd-1 calmodulin status:Confirmed TR:O16305 protein_id:AAB65364.1 [wormpep115.fasta.reversed]
  • CE13902 calmodulin status:Confirmed TR:O16305 protein_id:AAB65364.1 [wormpep80.hongbin]
  • CE13902 WBGene00000552 locus:cmd-1 calmodulin status:Confirmed UniProt:O16305 protein_id:AAB65364.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE13902 WBGene00000552 locus:cmd-1 calmodulin status:Confirmed UniProt:O16305 protein_id:AAB65364.1| [wormORF-contam.fasta]
  • Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin [nr-271106-contam.fasta]
  • T21H3.3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Calmodulin protein 1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • calmodulin [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Calmodulin (CaM) [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE13902 WBGene00000552 locus:cmd-1 calmodulin status:Confirmed UniProt:O16305 protein_id:CCD69969.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE13902 WBGene00000552 locus:cmd-1 status:Confirmed UniProt:O16305 protein_id:CCD69969.1 Calmodulin [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 149 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: embryonic development [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    apoptotic cell clearance [IMPLink to PubMed article]
    regulation of apoptosis [IMPLink to PubMed article]
    gamete generation [IMPLink to PubMed article]
    regulation of cell cycle [IMPLink to PubMed article]
    cell migration [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: calcium ion binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADQLTEEQI AEFKEAFSLF DKDGDGTITT KELGTVMRSL GQNPTEAELQ DMINEVDADG  60
   61 NGTIDFPEFL TMMARKMKDT DSEEEIREAF RVFDKDGNGF ISAAELRHVM TNLGEKLTDE 120
  121 EVDEMIREAD IDGDGQVNYE EFVTMMTTK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..149] PSI-BLAST 39.221849 Structure of calmodulin bound to a calcineurin peptide: a new way of making an old binding mode


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle