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Protein Overview: CE13267

General Information:
Name(s) found: CE13267 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00011488 locus:nra-2 status:Confirmed UniProt:O18033 protein_id:CAB04692.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 557 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: protein processing [IEALink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: calcium ion binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQDEIIDFFR SPALLFYMTL MLTICVVNGS QQVGEVVETE FHAYRLHQYE ISGNIYGCKN  60
   61 YRVSYEAVSL GARTLRRTMV TTWRDLLTTD VDDMWALSTG AVLIFIPDNL DELNDIDRKA 120
  121 FIDLEAKLLS AKTDLAVYVA PFNDDAVSIL HDVNTRSEKA PTALQHLLQS LSGNTISITS 180
  181 SDQSPELPPS YKPLNIVGRL SSGDRAAPTI AFVAHYDTQS AVPGVSPGAD SNGSGIVALL 240
  241 ELLAVLSKFY DSPSTRPPYN ILFIWTAAGK LNYQGTRHWI DEYQKGFDSA DYAKSGLSRK 300
  301 DDRVDLAICI EAIGRKTGGF FMHAGKTPSE NSVAAQLLRR LNSISPKKNI ELVTKKISLT 360
  361 TVSAWEHEKF NIKRMPAITL STLPSPSDPA RNSILDLPSA LDEDELIDNI RLIGEAVLGY 420
  421 ILDLPESGPS SDSRVKSEAT MLSKDAVDKQ RVHHFIRQFA SRPRPVGDQR ATESITSNLA 480
  481 SVAAGYGNVF KSAVTITDAK AFGVTQNRLV AERVKPAVFE LVIAAGVFTY LSAFYYIATH 540
  541 SQNTIEGTVA AIRKSIF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..557] PSI-BLAST 75.69897 No description for 2ootA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.32879486130719 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  0.494380623763342 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.437703290467567 bayes_pls_golite062009
  • receptor activity
    		•  0.422941307819965 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.331034243637565 bayes_pls_golite062009
  • hydrolase activity
    		•  0.268899853285984 bayes_pls_golite062009
  • DNA binding
    		•  0.253291282804265 bayes_pls_golite062009
  • signal transducer activity
    		•  0.0305928044064539 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.0305928044064539 bayes_pls_golite062009
  • protein binding
    		•  0.00854198798870509 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.23

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle