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Protein Overview: CE12896

General Information:
Name(s) found: CE12896 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00006374 locus:syn-4 syntaxin status:Confirmed SW:P91409 protein_id:AAB38000.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 287 amino acids

    Gene Ontology:
    Cellular Component: integral to plasma membrane [IDA]
    perinuclear region of cytoplasm [IDA]
    cleavage furrow [IDA]
    membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: cell division [IMP]
    embryonic development ending in birth or egg hatching [IMP]
    cytokinesis [IMP]
    intracellular protein transport [IEALink to PubMed article]
    receptor-mediated endocytosis [IMP]
    reproduction [IMP]
    Molecular Function: SNAP receptor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHQISGINAA SPEKNNSKLA DVSLQQFLAN VDEIRHVLTT LSADRHAIYM EQVESLAAGC  60
   61 SDTAKCRKLN DHVDKFIAQA RGIRRRLADA SEELVQYPES RVGSGRARHE QIQMLIVSLE 120
  121 GIMSQFADDQ ASYKAEAAKK IAAYLRKQNI EVTDSEIDGA IENGSLFQLT RNINLGVAQK 180
  181 KALFDDMKNR ATDIMILEKQ IREVEELFVD MQLLVQSQGE TVDRIETSVI RAEEYAEQAQ 240
  241 QNVRQAVVLR RKNRKWKIVT CIALIVLLLV VVYLLSHFLG AIIPGWK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..287] PSI-BLAST 34.69897 Syntaxin 1A N-terminal domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle