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Protein Overview: fpn-1.2

General Information:
Name(s) found: fpn-1.2 / CE12624 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00019977 locus:fpn-1.2 status:Partially_confirmed UniProt:O44607 protein_id:CCD68880.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 551 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: iron ion transport [IEALink to PubMed article]
    Molecular Function: iron ion transmembrane transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCTNTLLNFL PVITEYIEVI ANMEISKCVA GDGSAEISSL IPVTMTFQQP NNRRNSGTLS  60
   61 KTSIFLYCAY ISTCLEDRAW SFCVSLCMDL MGGMRVVSIE QLFEGVLQMF LSGYLGKHFD 120
  121 GLSRKRAIMT VVPLNNLSIC AAAALIITCL SIDATSPWYI VCLVLAMCIC AVNRLFLNAE 180
  181 KFITGRDWVM VLGNDGTLSN MNATLLTLDQ CTNVIAPLVT GALVTWVGLR ETVGIFGIAS 240
  241 LVSMASKTIF LRAIYISNPL LQVKKDKKDE ALDPFANSRL KESVVYTYWC QISFPAAFGM 300
  301 SLLFMTVMGF DGLAVGYGSS VGLPEFVIGA FRSYGSVTAI LGAFSYAFFE KRYSVATSGL 360
  361 LGLVVQQFFA VLAVISVFLP GSPMNLGGYF GNFTMGTWWH DMVHSFDGNN ATNLDPHVDW 420
  421 KHFSSDGVSL ASIFVFLIAI ASARYGLWCL DLAITHIMQV TIPERERNTV FGMHNALCQT 480
  481 FSVLKDVLVI ILPLPATFAI CIFISYGFVS CGHMFFIYYL VKTNSLSTVG RKLSQLPEKE 540
  541 EKEEKEEFER L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..467] PSI-BLAST 32.522879 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
    2 View Details [468..551] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • substrate-specific transmembrane transporter activity
    		•  3.58726613324261 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.55901085670553 bayes_pls_golite062009
  • transporter activity
    		•  2.54286095434601 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  2.2495455207657 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.01247278444729 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.77039368764865 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.33203350453105 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.24475883286552 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.24475883286552 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.2309068592963 bayes_pls_golite062009
  • binding
    		•  0.105551689569449 bayes_pls_golite062009
  • glycerol-3-phosphate transmembrane transporter activity
    		•  1.26964387230144E-4 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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