| Protein: | fpn-1.2 |
| Organism: | Caenorhabditis elegans |
| Length: | 551 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fpn-1.2.
| Description | E-value | Query Range |
Subject Range |
|
|
194.0 | [0..4] | [445..1314] |
|
Region A: Residues: [1-467] |
1 11 21 31 41 51
| | | | | |
1 MCTNTLLNFL PVITEYIEVI ANMEISKCVA GDGSAEISSL IPVTMTFQQP NNRRNSGTLS 60
61 KTSIFLYCAY ISTCLEDRAW SFCVSLCMDL MGGMRVVSIE QLFEGVLQMF LSGYLGKHFD 120
121 GLSRKRAIMT VVPLNNLSIC AAAALIITCL SIDATSPWYI VCLVLAMCIC AVNRLFLNAE 180
181 KFITGRDWVM VLGNDGTLSN MNATLLTLDQ CTNVIAPLVT GALVTWVGLR ETVGIFGIAS 240
241 LVSMASKTIF LRAIYISNPL LQVKKDKKDE ALDPFANSRL KESVVYTYWC QISFPAAFGM 300
301 SLLFMTVMGF DGLAVGYGSS VGLPEFVIGA FRSYGSVTAI LGAFSYAFFE KRYSVATSGL 360
361 LGLVVQQFFA VLAVISVFLP GSPMNLGGYF GNFTMGTWWH DMVHSFDGNN ATNLDPHVDW 420
421 KHFSSDGVSL ASIFVFLIAI ASARYGLWCL DLAITHIMQV TIPERER
|
| Detection Method: |  |
| Confidence: | 32.522879 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| substrate-specific transmembrane transporter activity | 3.58726613324261 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.55901085670553 | bayes_pls_golite062009 |
| transporter activity | 2.54286095434601 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 2.2495455207657 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.01247278444729 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.77039368764865 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.33203350453105 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.24475883286552 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.24475883286552 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.2309068592963 | bayes_pls_golite062009 |
| binding | 0.105551689569449 | bayes_pls_golite062009 |
| glycerol-3-phosphate transmembrane transporter activity | 1.26964387230144E-4 | bayes_pls_golite062009 |
|
Region A: Residues: [468-551] |
1 11 21 31 41 51
| | | | | |
1 NTVFGMHNAL CQTFSVLKDV LVIILPLPAT FAICIFISYG FVSCGHMFFI YYLVKTNSLS 60
61 TVGRKLSQLP EKEEKEEKEE FERL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
