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Protein Overview: his-24

General Information:
Name(s) found: his-24 / CE12450 [WormBase]
Description(s) found:
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  • WBGene00001898 locus:his-24 Histone H1.1 status:Confirmed UniProt:P10771 protein_id:CAB01892.1 [WormBase]
  • pir||T23778 histone H1.1 - Caenorhabditis elegans [NCBI NR]
  • gi|54041076|sp|P10771.4|H11_CAEEL RecName: Full=Histone H1.1 [NCBI NR]
  • gi|3878755|emb|CAB01892.1| C. elegans protein M163.3, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|2407321|gb|AAB70665.1| histone H1.1 [Caenorhabditis elegans] [NCBI NR]
  • gi|17569031|ref|NP_510410.1| HIStone family member (his-24) [Caenorhabditis elegans] [NCBI NR]
  • Histone H1.1 OS=Caenorhabditis elegans GN=his-24 PE=1 SV=4 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE12450 WBGene00001898 locus:his-24 histone H1 status:Confirmed SW:P10771 protein_id:CAB01892.1 [wormpep150.fasta]
  • 12450 WBGene00001898 locus:his-24 histone H1 status:Confirmed TR:Q93901 protein_id:CAB01892.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • histone, H1.1 (21.4 kD) (his-24) [Caenorhabditis elegans]gi|3878755|emb|CAB01892.1| Hypothetical protein M163.3 [Caenorhabditis elegans]gi|2407321|gb|AAB70665.1| histone H1.1 [Caenorhabditis elegans]gi|7506068|pir||T23778 histone H1.1 - Caenorhabditis [nrdb_11152004_Chlamydomonas]
  • CE12450 WBGene00001898 locus:his-24 histone H1 status:Confirmed TR:Q93901 protein_id:CAB01892.1 [wormpep132.fasta]
  • 12450 WBGene00001898 locus:his-24 histone H1 status:Confirmed SW:P10771 protein_id:CAB01892.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • locus:his-24 histone H1 status:Confirmed TR:Q93901 protein_id:CAB01892.1 [wormpep115.fasta.reversed]
  • CE12450 locus:his-24 histone H1 status:Confirmed TR:Q93901 protein_id:CAB01892.1 [wormpep80.hongbin]
  • CE12450 WBGene00001898 locus:his-24 histone H1 status:Confirmed UniProt:P10771 protein_id:CAB01892.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE12450 WBGene00001898 locus:his-24 histone H1 status:Confirmed UniProt:P10771 protein_id:CAB01892.1| [wormORF-contam.fasta]
  • Hypothetical protein M163.3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Histone H1.1 [nr-271106-contam.fasta]
  • histone H1.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • HIStone family member (his-24) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE12450 WBGene00001898 locus:his-24 status:Confirmed UniProt:P10771 protein_id:CAB01892.1 Histone H1.1 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 208 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][IEALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    nucleosome [IEALink to PubMed article]
    Biological Process: nucleosome assembly [IEALink to PubMed article]
    Molecular Function: DNA binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDSAVVAAA VEPKVPKAKA AKAAKPTKVA KAKAPVAHPP YINMIKEAIK QLKDRKGASK  60
   61 QAILKFISQN YKLGDNVIQI NAHLRQALKR GVTSKALVQA AGSGANGRFR VPEKAAAAKK 120
  121 PAAAKKPAAA KKPAAAKKAT GEKKAKKPAA AKPKKAATGD KKVKKAKSPK KVAKPAAKKV 180
  181 AKSPAKKAAP KKIAKPAAKK AAKPAAKA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..126] PSI-BLAST 9.69897 Histone H5, globular domain
    2 View Details [127..208] FFAS03 1.46 Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.835523092977445 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.4843036104266 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.37117756729668 bayes_pls_golite062009
  • DNA binding
    		•  0.3118855114645 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle