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Protein Overview: pept-3

General Information:
Name(s) found: pept-3 / CE11268 [WormBase]
Description(s) found:
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  • WBGene00003878 locus:pept-3 Peptide transporter 3 status:Confirmed UniProt:O01840 protein_id:CCD71980.1 [WormBase]
  • pir||T15235 hypothetical protein F56F4.5 - Caenorhabditis elegans [NCBI NR]
  • gi|71987453|ref|NP_491767.3| OligoPeptide Transporter family member (opt-3) [Caenorhabditis elegans] [NCBI NR]
  • gi|2811011|sp|O01840.1|OPT3_CAEEL RecName: Full=Putative oligopeptide transporter opt-3 [NCBI NR]
  • gi|2088774|gb|AAB54202.1| Oligopeptide transporter protein 3 [Caenorhabditis elegans] [NCBI NR]
  • Peptide transporter 3 OS=Caenorhabditis elegans GN=pept-3 PE=1 SV=1 [Swiss-Prot]
  • Putative oligopeptide transporter opt-3 OS=Caenorhabditis elegans GN=opt-3 PE=1 SV=1 [Swiss-Prot]
  • (O01840) Hypothetical oligopeptide transporter F56F4.5 [Swiss-Prot]
  • [wormpep67.fasta]
  • Oligopeptide transporter protein 3 [Caenorhabditis elegans]gi|7447001|pir||T15235 hypothetical protein F56F4.5 - Caenorhabditis elegansgi|2811011|sp|O01840|OPT2_CAEEL Hypothetical oligopeptide transporter F56F4.5 [nrdb_11152004_Chlamydomonas]
  • CE11268 WBGene00003878 locus:opt-3 oligopeptide transporter status:Confirmed SW:O01840 protein_id:AAB54202.1 [wormpep150.fasta]
  • 11268 WBGene00003878 locus:opt-3 oligopeptide transporter status:Confirmed SW:O01840 protein_id:AAB54202.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • locus:opt-3 oligopeptide transporter status:Confirmed SW:O01840 protein_id:AAB54202.1 [wormpep115.fasta.reversed]
  • CE11268 oligopeptide transporter status:Confirmed SW:O01840 protein_id:AAB54202.1 [wormpep80.hongbin]
  • CE11268 WBGene00003878 locus:opt-3 oligopeptide transporter status:Confirmed UniProt:OPT3_CAEEL protein_id:AAB54202.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE11268 WBGene00003878 locus:opt-3 oligopeptide transporter status:Confirmed UniProt:OPT3_CAEEL protein_id:AAB54202.1| [wormORF-contam.fasta]
  • Oligopeptide transporter protein 3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Putative oligopeptide transporter opt-3 [nr-271106-contam.fasta]
  • OligoPeptide Transporter family member (opt-3) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE11268 WBGene00003878 locus:pept-3 oligopeptide transporter status:Confirmed UniProt:O01840 protein_id:AAB54202.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE11268 WBGene00003878 locus:pept-3 oligopeptide transporter status:Confirmed UniProt:O01840 protein_id:CCD71980.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE11268 WBGene00003878 locus:pept-3 status:Confirmed UniProt:O01840 protein_id:CCD71980.1 Peptide transporter 3 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 701 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: oligopeptide transport [IEALink to PubMed article]
    drug transport [IEALink to PubMed article]
    chromosome segregation [IMPLink to PubMed article]
    Molecular Function: oligopeptide transporter activity [IEALink to PubMed article]
    transporter activity [IEALink to PubMed article]
    drug transmembrane transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEKSLLQKL RSYPPAVFFM LGNEFCERFS FYGMKTILFI YLITEHEFSP SKATFIYHLF  60
   61 TCIAYLTPLI GSIMADSVFG RFKVILYGSS IYVVGHVLLS LGAVPFLSYP IRSSLDFSGL 120
  121 FVIAFATGCI KPCVSAFAAD QFTEDQKDLR SQFFSFFYFA INGGSLFAII ITPILRGRVQ 180
  181 CFGNAHCFPL AFGVPGVLML LALILFLMGW SMYKKHPPSK ENVGSKVVAV IYTSLRKMVG 240
  241 GASRDKPVTH WLDHAAPEHS QKMIDSTRGL LNVAVIFCPL IFFWALFDQQ GSTWVLQARR 300
  301 LDGRVGHFSI LPEQIHAINP VCVLILVPIF EGWVYPALRK ITRVTPLRKM AVGGLLTAFS 360
  361 FAIAGVLQLK VNETMEFPPS LGRIYLQRVG NESLISDFRY KSDGRLIGDG MLPKGRTELD 420
  421 AGIYTFNTGL KNESQEIDIS TPNKGYVMAV FRLKDAVEVV KFDYKVEKTD NGATRVFVVT 480
  481 AREDADTLVY AINKKGKILS SCELKSGSYV DVIPGIISDP NVRLYWGPKN SCSGVDCPNT 540
  541 VTLNAQMGAV HVLHIHPSTT EGDFNLLVRP NSVSILWSLP QYIIITLGEV LLSVTGLEFA 600
  601 YSQAAPNMKS VLTAMWLLTV FAGNLIDMMI SGTRLIPHPA LEFFFYSTLM VIVMGVFILL 660
  661 AMQYTYVEDN DDEITITESE KKDVIALTEI ESGTATSDKK E

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..468] PSI-BLAST 20.154902 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
    2 View Details [469..701] FFAS03 2.38 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transporter activity
    		•  4.09176719149278 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.59744164024479 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.5865018981083 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.54194478414824 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.21266150105753 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
    		•  2.15783210522667 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.79369588808394 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.59419818573076 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  1.22264637452409 bayes_pls_golite062009
  • binding
    		•  1.05701989682533 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.812001619402678 bayes_pls_golite062009
  • symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  0.143419068761182 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  0.143419068761182 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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