| Protein: | pept-3 |
| Organism: | Caenorhabditis elegans |
| Length: | 701 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pept-3.
| Description | E-value | Query Range |
Subject Range |
|
|
303.0 | [0..4] | [700..3] |
|
Region A: Residues: [1-468] |
1 11 21 31 41 51
| | | | | |
1 MEEKSLLQKL RSYPPAVFFM LGNEFCERFS FYGMKTILFI YLITEHEFSP SKATFIYHLF 60
61 TCIAYLTPLI GSIMADSVFG RFKVILYGSS IYVVGHVLLS LGAVPFLSYP IRSSLDFSGL 120
121 FVIAFATGCI KPCVSAFAAD QFTEDQKDLR SQFFSFFYFA INGGSLFAII ITPILRGRVQ 180
181 CFGNAHCFPL AFGVPGVLML LALILFLMGW SMYKKHPPSK ENVGSKVVAV IYTSLRKMVG 240
241 GASRDKPVTH WLDHAAPEHS QKMIDSTRGL LNVAVIFCPL IFFWALFDQQ GSTWVLQARR 300
301 LDGRVGHFSI LPEQIHAINP VCVLILVPIF EGWVYPALRK ITRVTPLRKM AVGGLLTAFS 360
361 FAIAGVLQLK VNETMEFPPS LGRIYLQRVG NESLISDFRY KSDGRLIGDG MLPKGRTELD 420
421 AGIYTFNTGL KNESQEIDIS TPNKGYVMAV FRLKDAVEVV KFDYKVEK
|
| Detection Method: |  |
| Confidence: | 20.154902 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.54194478414824 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.21266150105753 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 2.15783210522667 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.79369588808394 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| binding | 1.05701989682533 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
|
Region A: Residues: [469-701] |
1 11 21 31 41 51
| | | | | |
1 TDNGATRVFV VTAREDADTL VYAINKKGKI LSSCELKSGS YVDVIPGIIS DPNVRLYWGP 60
61 KNSCSGVDCP NTVTLNAQMG AVHVLHIHPS TTEGDFNLLV RPNSVSILWS LPQYIIITLG 120
121 EVLLSVTGLE FAYSQAAPNM KSVLTAMWLL TVFAGNLIDM MISGTRLIPH PALEFFFYST 180
181 LMVIVMGVFI LLAMQYTYVE DNDDEITITE SEKKDVIALT EIESGTATSD KKE
|
| Detection Method: | |
| Confidence: | 2.38 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
| Matching Structure (courtesy of the PDB): |
|
