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Protein Overview: CE10464

General Information:
Name(s) found: CE10464 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00018446 locus:ceh-83 status:Partially_confirmed UniProt:O16749 protein_id:CCD71265.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 543 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    membrane [IEALink to PubMed article]
    Biological Process: protein targeting [IEALink to PubMed article]
    regulation of transcription, DNA-dependent [IEALink to PubMed article]
    intracellular protein transport [IEALink to PubMed article]
    Molecular Function: transcription factor activity [IEALink to PubMed article]
    sequence-specific DNA binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRRVTRSMG GSIASATIDT STPTTRLTTR KRTAQQQTPV DSSSSSSDAS DESFVACPVE  60
   61 AKRRKKKLTN SRKSTSELPE KKKTDKVNLQ RPDIKKALFE HFEKNPKPES ESLQKISAQL 120
  121 GLTQQQVTGW FNRRNGTYLI SGPHNSVSKA DRKLSHMTKK LGERIMEKFE SDDLPSVELK 180
  181 EQWAQELRTT VQKVHVLLYK TRAEVMKSYL NGERADLPRK MKAILEAEYD KSDGVDDVHI 240
  241 RECKDQCELS YSLIEEYFQM RRKAEQKAQE NSVAQEVAHR EVAQQEVVQQ DQDGPGSHQE 300
  301 VAQDQEIAEQ SAVVAKTSIV VQEVAEQGSE QELDHPLLVE NLETICHRDN IRLFTDFHQK 360
  361 RKHPSHADFQ NLSRQTGRSV ELIRHWFSLK NESQEPEKTT SVSRISPIPV EDAKQQVMEL 420
  421 LKTDSNPSVY LKRQWAEQFN ISMCMISNWK AELENPAIAR VMAERKRTSN LDYASRILEQ 480
  481 KFANRANLLP SDLVDLEKTI GWTLDEISEW FETREKLQER RESSEAGRDF SSRSIKQEII 540
  541 TIE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..212] PSI-BLAST 14.221849 Oct-1 POU Homeodomain; Oct-1
    2 View Details [213..439] MSA 1.336992 View MSA. No confident structure predictions are available.
    3 View Details [440..543] PSI-BLAST 12.69897 Solution structure of the homeobox domain of the human paired box protein Pax-6

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.971797124886045 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.74904610690468 bayes_pls_golite062009
  • DNA binding
    		•  0.73457854282882 bayes_pls_golite062009
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.71

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle