| Protein: | CE10464 |
| Organism: | Caenorhabditis elegans |
| Length: | 543 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE10464.
| Description | E-value | Query Range |
Subject Range |
|
|
164.0 | [0..2] | [434..26] |
|
Region A: Residues: [1-212] |
1 11 21 31 41 51
| | | | | |
1 MTRRVTRSMG GSIASATIDT STPTTRLTTR KRTAQQQTPV DSSSSSSDAS DESFVACPVE 60
61 AKRRKKKLTN SRKSTSELPE KKKTDKVNLQ RPDIKKALFE HFEKNPKPES ESLQKISAQL 120
121 GLTQQQVTGW FNRRNGTYLI SGPHNSVSKA DRKLSHMTKK LGERIMEKFE SDDLPSVELK 180
181 EQWAQELRTT VQKVHVLLYK TRAEVMKSYL NG
|
| Detection Method: |  |
| Confidence: | 14.221849 |
| Match: | 1gt0C |
| Description: | Oct-1 POU Homeodomain; Oct-1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.971797124886045 | bayes_pls_golite062009 |
| nucleic acid binding | 0.74904610690468 | bayes_pls_golite062009 |
| DNA binding | 0.73457854282882 | bayes_pls_golite062009 |
|
Region A: Residues: [213-439] |
1 11 21 31 41 51
| | | | | |
1 ERADLPRKMK AILEAEYDKS DGVDDVHIRE CKDQCELSYS LIEEYFQMRR KAEQKAQENS 60
61 VAQEVAHREV AQQEVVQQDQ DGPGSHQEVA QDQEIAEQSA VVAKTSIVVQ EVAEQGSEQE 120
121 LDHPLLVENL ETICHRDNIR LFTDFHQKRK HPSHADFQNL SRQTGRSVEL IRHWFSLKNE 180
181 SQEPEKTTSV SRISPIPVED AKQQVMELLK TDSNPSVYLK RQWAEQF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [440-543] |
1 11 21 31 41 51
| | | | | |
1 NISMCMISNW KAELENPAIA RVMAERKRTS NLDYASRILE QKFANRANLL PSDLVDLEKT 60
61 IGWTLDEISE WFETREKLQE RRESSEAGRD FSSRSIKQEI ITIE
|
| Detection Method: | |
| Confidence: | 12.69897 |
| Match: | 2cueA |
| Description: | Solution structure of the homeobox domain of the human paired box protein Pax-6 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
