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Protein Overview: rpt-2

General Information:
Name(s) found: rpt-2 / CE09799 [WormBase]
Description(s) found:
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  • WBGene00004502 locus:rpt-2 Probable 26S protease regulatory subunit 4 status:Confirmed UniProt:O16368 protein_id:CCD64135.1 [WormBase]
  • pir||T31800 hypothetical protein F29G9.5 - Caenorhabditis elegans [NCBI NR]
  • gi|3122624|sp|O16368.1|PRS4_CAEEL RecName: Full=Probable 26S protease regulatory subunit 4 [NCBI NR]
  • gi|2315358|gb|AAB65906.1| Proteasome regulatory particle, atpase-like protein 2 [Caenorhabditis elegans] [NCBI NR]
  • gi|17563250|ref|NP_504558.1| proteasome Regulatory Particle, ATPase-like family member (rpt-2) [Caenorhabditis elegans] [NCBI NR]
  • Probable 26S protease regulatory subunit 4 OS=Caenorhabditis elegans GN=rpt-2 PE=3 SV=1 [Swiss-Prot]
  • [wormpep67.fasta]
  • CE09799 WBGene00004502 locus:rpt-2 ATPase status:Confirmed SW:O16368 protein_id:AAB65906.1 [wormpep150.fasta]
  • 09799 WBGene00004502 locus:rpt-2 ATPase status:Confirmed SW:O16368 protein_id:AAB65906.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • proteasome Regulatory Particle, ATPase-like, S4 (49.7 kD) (rpt-2) [Caenorhabditis elegans]gi|2315358|gb|AAB65906.1| Proteasome regulatory particle, atpase-like protein 2 [Caenorhabditis elegans]gi|7500175|pir||T31800 hypothetical protein F29G9.5 - Caeno [nrdb_11152004_Chlamydomonas]
  • locus:rpt-2 ATPase status:Partially_confirmed SW:O16368 protein_id:AAB65906.1 [wormpep115.fasta.reversed]
  • CE09799 locus:rpt-2 ATPase status:Partially_confirmed [wormpep80.hongbin]
  • CE09799 WBGene00004502 locus:rpt-2 ATPase status:Confirmed UniProt:PRS4_CAEEL protein_id:AAB65906.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE09799 WBGene00004502 locus:rpt-2 ATPase status:Confirmed UniProt:PRS4_CAEEL protein_id:AAB65906.1| [wormORF-contam.fasta]
  • Proteasome regulatory particle, atpase-like protein 2 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • F29G9.5 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Probable 26S protease regulatory subunit 4 [nr-271106-contam.fasta]
  • CE09799 WBGene00004502 locus:rpt-2 ATPase status:Confirmed UniProt:O16368 protein_id:AAB65906.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE09799 WBGene00004502 locus:rpt-2 ATPase status:Confirmed UniProt:O16368 protein_id:CCD64135.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE09799 WBGene00004502 locus:rpt-2 status:Confirmed UniProt:O16368 protein_id:CCD64135.1 Probable 26S protease regulatory subunit 4 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 443 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    cytoplasm [IEALink to PubMed article]
    membrane [IEALink to PubMed article]
    Biological Process: embryonic cleavage [IMPLink to PubMed article]
    protein catabolic process [IEALink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: nucleotide binding [IEALink to PubMed article]
    ATP binding [IEALink to PubMed article]
    nucleoside-triphosphatase activity [IEALink to PubMed article]
    metalloendopeptidase activity [IEALink to PubMed article]
    hydrolase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQQQSGFGG RGNDRGAGDG EKKEKKKYEA PIPSRIGKKK KGSKGPDAAS KLPAVTPHAR  60
   61 CRLKLLKSER IKDYLLMEQE FIQNQERLKP QEERQEEERA KVDELRGTPM AVGSLEEIID 120
  121 DQHAIVSTNV GSEHYVNIMS FVDKEQLEPG CSVLLNHKNH AVIGVLSDDT DPMVSVMKLE 180
  181 KAPQETYADV GGLDQQIQEI KEAVELPLTH PEYYEEMGIR PPKGVILYGC PGTGKTLLAK 240
  241 AVANQTSATF LRIVGSELIQ KYLGDGPKMV RELFRVAEEN APSIVFIDEI DAVGTKRYDS 300
  301 NSGGEREIQR TMLELLNQLD GFDSRGDVKV LMATNRIESL DPALIRPGRI DRKIEFPLPD 360
  361 EKTKRRIFQI HTSRMTLGKE VNLEEFITAK DELSGADIKA MCTEAGLLAL RERRMRVTME 420
  421 DFQKSKENVL YRKKEGAPEE LYL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run None Entered No Comments Cheeseman, I.M., et al. (2004)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..443] PSI-BLAST 81.522879 VCP/p97


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle