| Protein: | rpt-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 443 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rpt-2.
| Description | E-value | Query Range |
Subject Range |
|
|
380.0 | [0..1] | [443..1] |
|
Region A: Residues: [1-443] |
1 11 21 31 41 51
| | | | | |
1 MGQQQSGFGG RGNDRGAGDG EKKEKKKYEA PIPSRIGKKK KGSKGPDAAS KLPAVTPHAR 60
61 CRLKLLKSER IKDYLLMEQE FIQNQERLKP QEERQEEERA KVDELRGTPM AVGSLEEIID 120
121 DQHAIVSTNV GSEHYVNIMS FVDKEQLEPG CSVLLNHKNH AVIGVLSDDT DPMVSVMKLE 180
181 KAPQETYADV GGLDQQIQEI KEAVELPLTH PEYYEEMGIR PPKGVILYGC PGTGKTLLAK 240
241 AVANQTSATF LRIVGSELIQ KYLGDGPKMV RELFRVAEEN APSIVFIDEI DAVGTKRYDS 300
301 NSGGEREIQR TMLELLNQLD GFDSRGDVKV LMATNRIESL DPALIRPGRI DRKIEFPLPD 360
361 EKTKRRIFQI HTSRMTLGKE VNLEEFITAK DELSGADIKA MCTEAGLLAL RERRMRVTME 420
421 DFQKSKENVL YRKKEGAPEE LYL
|
| Detection Method: |  |
| Confidence: | 81.522879 |
| Match: | 1oz4A |
| Description: | VCP/p97 |
Matching Structure (courtesy of the PDB): |
|
