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Protein Overview: sra-20

General Information:
Name(s) found: sra-20 / CE09751 [WormBase]
Description(s) found:
Found 22 descriptions.
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  • WBGene00005046 locus:sra-20 Serpentine receptor class alpha-20 status:Partially_confirmed UniProt:O17844 protein_id:CAB07600.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 339 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: sensory perception of chemical stimulus [IEALink to PubMed article]
    Molecular Function: transmembrane receptor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKTAEELVE SLRCASEGLT NALTSITVKV SFVFLATVIL LSYYFAVLAI RALWNNNIFS  60
   61 NSTRLILIVC LLNSVVHQST MMEIRIRQVY RSFVYSSEPC RLPFHFTDCE VELYFYYLTN 120
  121 YFSTYSVFSL TFDRLISYFF PKCYISYPYQ VSISLLIIQL VFTLGTYYFG LYGVPKLGYV 180
  181 PICNYAPRLA TNFVKINDFR TTIMVFCIIV TIFIYYLNVK SEKQIKRTSY SLGEQYLARE 240
  241 NVATSQSVCI LIVLQFVCIS VSSFGVNYIK SIKSTLSDEE YNKIAPFVVG VTYANLCLPL 300
  301 VIYFKTKLTI RKRRIRIGVM TSVYGDVGEH INRLKKSWE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..339] PSI-BLAST 46.221849 Rhodopsin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle