| Protein: | sra-20 |
| Organism: | Caenorhabditis elegans |
| Length: | 339 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sra-20.
| Description | E-value | Query Range |
Subject Range |
|
|
198.0 | [0..11] | [319..353] |
|
Region A: Residues: [1-339] |
1 11 21 31 41 51
| | | | | |
1 MNKTAEELVE SLRCASEGLT NALTSITVKV SFVFLATVIL LSYYFAVLAI RALWNNNIFS 60
61 NSTRLILIVC LLNSVVHQST MMEIRIRQVY RSFVYSSEPC RLPFHFTDCE VELYFYYLTN 120
121 YFSTYSVFSL TFDRLISYFF PKCYISYPYQ VSISLLIIQL VFTLGTYYFG LYGVPKLGYV 180
181 PICNYAPRLA TNFVKINDFR TTIMVFCIIV TIFIYYLNVK SEKQIKRTSY SLGEQYLARE 240
241 NVATSQSVCI LIVLQFVCIS VSSFGVNYIK SIKSTLSDEE YNKIAPFVVG VTYANLCLPL 300
301 VIYFKTKLTI RKRRIRIGVM TSVYGDVGEH INRLKKSWE
|
| Detection Method: |  |
| Confidence: | 46.221849 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
