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Protein Overview: rab-5

General Information:
Name(s) found: rab-5 / CE09711 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00004268 locus:rab-5 status:Partially_confirmed UniProt:P91857 protein_id:CAB04205.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 208 amino acids

    Gene Ontology:
    Cellular Component: endosome [IDALink to PubMed article]
    cell cortex [IDALink to PubMed article]
    intracellular [IEALink to PubMed article]
    Biological Process: embryonic cleavage [IMPLink to PubMed article]
    signal transduction [IEALink to PubMed article]
    small GTPase mediated signal transduction [IEALink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    protein transport [IEALink to PubMed article]
    intracellular protein transport [IEALink to PubMed article]
    protein secretion [IMPLink to PubMed article]
    growth [IMPLink to PubMed article]
    asymmetric protein localization [IMP]
    cytoplasm organization [IMPLink to PubMed article]
    nucleocytoplasmic transport [IEALink to PubMed article]
    cell death [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    Molecular Function: GTP binding [IEALink to PubMed article]
    protein binding [IEALink to PubMed article]
    GTPase activity [IEALink to PubMed article][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAARNAGTAR PGGPNRTCQF KLVLLGESAV GKSSLVLRFV KGQFHEYQES TIGAAFLTQT  60
   61 VCLDDATIKF EIWDTAGQER YHSLAPMYYR GAQAAIVVYD ITNQESFQKA KNWVKELQRQ 120
  121 ASPNIVMALA GNKADVANKR TVEYEEANAY AEDNALLFME TSAKTSMNVN DIFMAIAKKL 180
  181 PIGPAQGEPT GTVDMNQPQQ QQKGSCCK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..208] PSI-BLAST 44.69897 No description for 2heiA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle