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Protein Overview: rhr-1

General Information:
Name(s) found: rhr-1 / CE09259 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00004358 locus:rhr-1 status:Confirmed UniProt:Q22947 protein_id:CCD65593.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 463 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    Biological Process: embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    transport [IEALink to PubMed article]
    Molecular Function: ammonium transmembrane transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSPLHQNQL TLILGLFQVV FLVIFALYGS YDASALPSET KNVEEAARMT NLYPLFQDTH  60
   61 VMIFIGFGFL MTFLKRYGFS AVSINMLLAV FTIQWGIIVR GMASAHHGFK FTISLEQLLT 120
  121 ADFAAAVILI SMGAMLGKLS PSQYVIMAFF ETPVALIVEH ICVHNLQIND VGGSIIVHAF 180
  181 GAYFGLACAK GFGKKEQRGH TNEGSTYHTD IFAMIGAIFL WIYWPSFNAA VAATDDARQR 240
  241 AVANTFLSLC ACTMTTFLVS QAVDKHKRFD MVHIANSTLA GGVAIGTTAN VVLEPYHAMI 300
  301 IGVIAGAVSV IGYKYITPFL SEKLGIHDTC GVNNLHGMPG LIAGFASIAF LFIYDETRYP 360
  361 AQYDKIYPGM ARGEDRTRMF DEKTQALNQL MAIGLVFLAS TVSGYLTGLL LKLKIWDQVR 420
  421 DDEYYADGDY FETPGDYDFT SRIVTSVKQI EVAEYNPLSQ KEV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..463] PSI-BLAST 81.09691 No description for 2ns1A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ammonium transmembrane transporter activity
    		•  10.0624820335928 bayes_pls_golite062009
  • organic cation transmembrane transporter activity
    		•  9.07420898067257 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  7.57181833547312 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  7.46308808953548 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  7.08971867997216 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  7.03159982829686 bayes_pls_golite062009
  • transporter activity
    		•  5.3870893301235 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  5.3046132351753 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  5.16067985999244 bayes_pls_golite062009
  • methylammonium transmembrane transporter activity
    		•  4.84543781800962 bayes_pls_golite062009
  • amine transmembrane transporter activity
    		•  2.81164277777293 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.08017669832334 bayes_pls_golite062009
  • high affinity secondary active ammonium transmembrane transporter activity
    		•  1.02646024539252 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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