YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: cln-3.1

General Information:
Name(s) found: cln-3.1 / CE09198 [WormBase]
Description(s) found:
Found 22 descriptions.
SHOW ALL
  • WBGene00000539 locus:cln-3.1 status:Confirmed UniProt:G5EBM4 protein_id:CAB01140.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 424 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    membrane [IEALink to PubMed article]
    Biological Process: regulation of oviposition [IGILink to PubMed article]
    determination of adult lifespan [IGILink to PubMed article][IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNWTNFRDI LAFWLLGLCN NYGYVIMLSA AEDILDDQKG TNSSSTNSST CETHLDSRHC  60
   61 QSISTGAVLL ADNLPALVVQ TTFPFFMHRF PFGFRAFLVF LLQASSYFVV AYSKNIAMSL 120
  121 AGVCMASLGQ GIGEITFLAM AAHYIPETIA SWSSGTGGAG LIGSFSYAFI TQAGLSPSNT 180
  181 LLVQLFIPVV FAGAYFFLLT IPPTVYSPTI HPSTWIIPKN YDKDVFEAAE ARGDVLNTKK 240
  241 VPQRELGPLE RIKLIGPLLY LMVPLATVYT AEYMINQGLT ELIIFNCSQG LSLPLSSQYR 300
  301 WYQVLYQLGV FISRSSVKFF EMPLWLIWCL PILQCVNMIF FFFEAVYWFT PTIIIIFVLI 360
  361 VFEGLLGGSA YVNTYNKIHK KVNPDVREYS LSAASMGNSL GTNIAAFLSI PLYNWVCTMK 420
  421 APGR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..424] PSI-BLAST 4.522879 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transporter activity
    		•  4.09176719149278 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.59744164024479 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.5865018981083 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.54194478414824 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.21266150105753 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
    		•  2.15783210522667 bayes_pls_golite062009
  • binding
    		•  1.89539096965643 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.79369588808394 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.59419818573076 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  1.22264637452409 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • hexose phosphate transmembrane transporter activity
    		•  0.901989724654833 bayes_pls_golite062009
  • glucose-6-phosphate transmembrane transporter activity
    		•  0.901989724654833 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.812001619402678 bayes_pls_golite062009
  • symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  0.143419068761182 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  0.143419068761182 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle