| Protein: | cln-3.1 |
| Organism: | Caenorhabditis elegans |
| Length: | 424 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cln-3.1.
| Description | E-value | Query Range |
Subject Range |
|
|
327.0 | [0..5] | [416..265] |
|
Region A: Residues: [1-424] |
1 11 21 31 41 51
| | | | | |
1 MVNWTNFRDI LAFWLLGLCN NYGYVIMLSA AEDILDDQKG TNSSSTNSST CETHLDSRHC 60
61 QSISTGAVLL ADNLPALVVQ TTFPFFMHRF PFGFRAFLVF LLQASSYFVV AYSKNIAMSL 120
121 AGVCMASLGQ GIGEITFLAM AAHYIPETIA SWSSGTGGAG LIGSFSYAFI TQAGLSPSNT 180
181 LLVQLFIPVV FAGAYFFLLT IPPTVYSPTI HPSTWIIPKN YDKDVFEAAE ARGDVLNTKK 240
241 VPQRELGPLE RIKLIGPLLY LMVPLATVYT AEYMINQGLT ELIIFNCSQG LSLPLSSQYR 300
301 WYQVLYQLGV FISRSSVKFF EMPLWLIWCL PILQCVNMIF FFFEAVYWFT PTIIIIFVLI 360
361 VFEGLLGGSA YVNTYNKIHK KVNPDVREYS LSAASMGNSL GTNIAAFLSI PLYNWVCTMK 420
421 APGR
|
| Detection Method: |  |
| Confidence: | 4.522879 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.54194478414824 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.21266150105753 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 2.15783210522667 | bayes_pls_golite062009 |
| binding | 1.89539096965643 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.79369588808394 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| hexose phosphate transmembrane transporter activity | 0.901989724654833 | bayes_pls_golite062009 |
| glucose-6-phosphate transmembrane transporter activity | 0.901989724654833 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
