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Protein Overview: ftn-1

General Information:
Name(s) found: ftn-1 / CE08986 [WormBase]
Description(s) found:
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  • WBGene00001500 locus:ftn-1 ferritin heavy chain status:Confirmed UniProt:O16453 protein_id:CCD62994.1 [WormBase]
  • pir||T31870 hypothetical protein C54F6.14 - Caenorhabditis elegans [NCBI NR]
  • gi|17558956|ref|NP_504944.1| FerriTiN family member (ftn-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|10864303|gb|AAG24016.1| Ferritin protein 1 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE08986 WBGene00001500 locus:ftn-1 ferritin heavy chain status:Confirmed TR:O16453 protein_id:AAG24016.1 [wormpep150.fasta]
  • 08986 WBGene00001500 locus:ftn-1 ferritin heavy chain status:Confirmed TR:O16453 protein_id:AAG24016.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • ferritin (19.5 kD) (ftn-1) [Caenorhabditis elegans]gi|10864303|gb|AAG24016.1| Ferritin protein 1 [Caenorhabditis elegans]gi|7497934|pir||T31870 hypothetical protein C54F6.14 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • locus:ftn-1 ferritin heavy chain status:Confirmed TR:O16453 protein_id:AAG24016.1 [wormpep115.fasta.reversed]
  • CE08986 ferritin heavy chain status:Confirmed TR:O16453 protein_id:AAG24016.1 [wormpep80.hongbin]
  • CE08986 WBGene00001500 locus:ftn-1 ferritin heavy chain status:Confirmed UniProt:O16453_CAEEL protein_id:AAG24016.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE08986 WBGene00001500 locus:ftn-1 ferritin heavy chain status:Confirmed UniProt:O16453_CAEEL protein_id:AAG24016.1| [wormORF-contam.fasta]
  • FerriTiN family member (ftn-1) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Ferritin protein 1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE08986 WBGene00001500 locus:ftn-1 ferritin heavy chain status:Confirmed UniProt:O16453 protein_id:AAG24016.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE08986 WBGene00001500 locus:ftn-1 ferritin heavy chain status:Confirmed UniProt:O16453 protein_id:CCD62994.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
    • Organism: Caenorhabditis elegans
    Length: 170 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: cellular iron ion homeostasis [IEALink to PubMed article]
    iron ion transport [IEALink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    determination of adult lifespan [IMPLink to PubMed article]
    Molecular Function: ferric iron binding [IEALink to PubMed article]
    binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLARQNYHD EVEAAVNKQI NVELYASYVY LSMSAHFDRD DIALRNIAKF FKEQSDEERG  60
   61 HATELMRIQA VRGGRVAMQN IQKPEKDEWG TVLEAFEAAL ALERANNASL LKLHGIAEQR 120
  121 NDAHLTNYIQ EKYLEEQVHS INEFARHIAN IKRAGPGLGE YLFDKEEFSD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..170] PSI-BLAST 62.69897 SOLVING THE STRUCTURE OF HUMAN H FERRITIN BY GENETICALLY ENGINEERING INTERMOLECULAR CRYSTAL CONTACTS

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ferric iron binding
    		•  5.55100638826026 bayes_pls_golite062009
  • iron ion binding
    		•  3.10225782829614 bayes_pls_golite062009
  • binding
    		•  1.95813969002966 bayes_pls_golite062009
  • transition metal ion binding
    		•  1.70242943635222 bayes_pls_golite062009
  • cation binding
    		•  1.66873432300081 bayes_pls_golite062009
  • metal ion binding
    		•  1.66873432300081 bayes_pls_golite062009
  • ion binding
    		•  1.66140448750278 bayes_pls_golite062009
  • ribonucleoside-diphosphate reductase activity
    		•  0.366005079572569 bayes_pls_golite062009
  • protein binding
    		•  0.30514049100341 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
    		•  0.289628933165632 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle