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Protein Overview: CE08501

General Information:
Name(s) found: CE08501 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00007842 status:Predicted UniProt:Q93310 protein_id:CAB01727.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 350 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: rRNA processing [IEALink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALFFWRDVL EYFKYFCVGC SVFLNTVLII LVLFRSPHSL GFYKYLMTYI YVFDLFYAVW  60
   61 DIITNPTVYS YGPAFVVFRN YDNSMFTREM SFYMVLVYCG CFAFSLACFG VHFMYRYGTV 120
  121 NNDFRERFLS GKKIYIIFAV PILCGSWWSV ISGVAFCFDE YSDEYLSQLN PICLIFRDAV 180
  181 KNDLNFNISS LASMVIFFYL PDENGKLHPH WKTFLVMTSI YTITFVSIFS VIFCGFKCYN 240
  241 CILQAMSITT VQSKISKSLQ HHVKSIFHTL IPMVLMYIPL FFVFALPLFN INFPYASTAI 300
  301 SATISIYLAI DPLPSMFIIK AYRKAVLGKL TNKLDACIIV FQNYLQSFYR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..350] PSI-BLAST 14.154902 Rhodopsin

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • signal transducer activity
    		•  2.84924321833745 bayes_pls_golite062009
  • molecular transducer activity
    		•  2.84924321833745 bayes_pls_golite062009
  • receptor activity
    		•  2.60107641562798 bayes_pls_golite062009
  • G-protein coupled receptor activity
    		•  2.31373153047959 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  2.25997016515401 bayes_pls_golite062009
  • binding
    		•  1.25657641043371 bayes_pls_golite062009
  • neurotransmitter receptor activity
    		•  1.23175245806577 bayes_pls_golite062009
  • neurotransmitter binding
    		•  1.12721043630775 bayes_pls_golite062009
  • peptide receptor activity
    		•  0.37018758961715 bayes_pls_golite062009
  • peptide receptor activity, G-protein coupled
    		•  0.36242852392182 bayes_pls_golite062009
  • peptide binding
    		•  0.227360304393403 bayes_pls_golite062009
  • photoreceptor activity
    		•  0.21630291600004 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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    Created and Maintained by: Michael Riffle