| Protein: | CE08501 |
| Organism: | Caenorhabditis elegans |
| Length: | 350 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE08501.
| Description | E-value | Query Range |
Subject Range |
|
|
176.0 | [0..1] | [350..1] |
|
Region A: Residues: [1-350] |
1 11 21 31 41 51
| | | | | |
1 MALFFWRDVL EYFKYFCVGC SVFLNTVLII LVLFRSPHSL GFYKYLMTYI YVFDLFYAVW 60
61 DIITNPTVYS YGPAFVVFRN YDNSMFTREM SFYMVLVYCG CFAFSLACFG VHFMYRYGTV 120
121 NNDFRERFLS GKKIYIIFAV PILCGSWWSV ISGVAFCFDE YSDEYLSQLN PICLIFRDAV 180
181 KNDLNFNISS LASMVIFFYL PDENGKLHPH WKTFLVMTSI YTITFVSIFS VIFCGFKCYN 240
241 CILQAMSITT VQSKISKSLQ HHVKSIFHTL IPMVLMYIPL FFVFALPLFN INFPYASTAI 300
301 SATISIYLAI DPLPSMFIIK AYRKAVLGKL TNKLDACIIV FQNYLQSFYR
|
| Detection Method: |  |
| Confidence: | 14.154902 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| signal transducer activity | 2.84924321833745 | bayes_pls_golite062009 |
| molecular transducer activity | 2.84924321833745 | bayes_pls_golite062009 |
| receptor activity | 2.60107641562798 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 2.31373153047959 | bayes_pls_golite062009 |
| transmembrane receptor activity | 2.25997016515401 | bayes_pls_golite062009 |
| binding | 1.25657641043371 | bayes_pls_golite062009 |
| neurotransmitter receptor activity | 1.23175245806577 | bayes_pls_golite062009 |
| neurotransmitter binding | 1.12721043630775 | bayes_pls_golite062009 |
| peptide receptor activity | 0.37018758961715 | bayes_pls_golite062009 |
| peptide receptor activity, G-protein coupled | 0.36242852392182 | bayes_pls_golite062009 |
| peptide binding | 0.227360304393403 | bayes_pls_golite062009 |
| photoreceptor activity | 0.21630291600004 | bayes_pls_golite062009 |
