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Protein Overview: CE07925

General Information:
Name(s) found: CE07925 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00015464 status:Confirmed UniProt:O16315 protein_id:CCD63093.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 467 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: carbohydrate metabolic process [IEALink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    growth [IMPLink to PubMed articleLink to PubMed article]
    Molecular Function: zinc ion binding [IEALink to PubMed article]
    mannose-6-phosphate isomerase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQLKCHVKQ YAWGKYGEES EVARLFADGH ESFQIDQKTP YAELWMGTHP DGPAQLKKCS  60
   61 TKLSTYLAKN PSPLTNNNSA KNIHLPFIMK VMSIRTTLSL QVHPTKEQAR RLHEKDPIHY 120
  121 PDRNHKPELA YALTRFELLC GFRPAREILQ NLQTFPSFRL LFGGDTYAKP LEDCIQQMKD 180
  181 LNSVDQKSTE FKDSRKYLED CFRFMMVPER NDVHDLIAKL LSELDNGLRG AVEEVTVGVI 240
  241 RKMSVDFPND IGIFSPLFLN HMILEPGQCC YYAAEELHAY LSGECVECVG CSNNTIRAAM 300
  301 TPKYIDRDAL CSVLNYKMTE QKDYLVPENK LTECVDMYAP DCKDFQLHRI RVGTHQTVEE 360
  361 MMIPTLDCAS IFVVVSGKGT LEEATIDNQL IGQYEVKRGD IFYIPPKHNI RFSSCSEPLE 420
  421 GYRTFSYEMG PDHDTRLVTP VQNAVPTITE KMFKLDADME EAITAVV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..467] PSI-BLAST 105.0 HUMAN RANTES

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  1.86690435826277 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.64913898350018 bayes_pls_golite062009
  • DNA binding
    		•  1.57178406956273 bayes_pls_golite062009
  • binding
    		•  1.54596514444405 bayes_pls_golite062009
  • transcription factor activity
    		•  0.937392765385803 bayes_pls_golite062009
  • intramolecular oxidoreductase activity
    		•  0.8581504516071 bayes_pls_golite062009
  • catalytic activity
    		•  0.401988496917198 bayes_pls_golite062009
  • oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
    		•  0.353173877157675 bayes_pls_golite062009
  • intramolecular oxidoreductase activity, interconverting aldoses and ketoses
    		•  0.348782780143283 bayes_pls_golite062009
  • protein binding
    		•  0.110960530780648 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle