YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: col-140

General Information:
Name(s) found: col-140 / CE07146 [WormBase]
Description(s) found:
SHOW ONLY BEST
  • WBGene00000713 locus:col-140 status:Confirmed UniProt:Q19813 protein_id:CCD62675.1 [WormBase]
  • pir||T34241 hypothetical protein F26F12.1 - Caenorhabditis elegans [NCBI NR]
  • gi|17560252|ref|NP_504525.1| COLlagen family member (col-140) [Caenorhabditis elegans] [NCBI NR]
  • gi|1280114|gb|AAC25888.1| Collagen protein 140, isoform a [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE07146 WBGene00000713 locus:col-140 cuticular collagen status:Confirmed TR:Q19813 protein_id:AAC25888.1 [wormpep150.fasta]
  • 07146 WBGene00000713 locus:col-140 cuticular collagen status:Confirmed TR:Q19813 protein_id:AAC25888.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • COLlagen structural gene (col-140) [Caenorhabditis elegans]gi|1280114|gb|AAC25888.1| Collagen protein 140 [Caenorhabditis elegans]gi|7499932|pir||T34241 hypothetical protein F26F12.1 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • locus:col-140 cuticular collagen status:Confirmed TR:Q19813 protein_id:AAC25888.1 [wormpep115.fasta.reversed]
  • CE07146 cuticular collagen status:Partially_confirmed TR:Q19813 protein_id:AAC25888.1 [wormpep80.hongbin]
  • CE07146 WBGene00000713 locus:col-140 cuticular collagen status:Confirmed UniProt:Q19813_CAEEL protein_id:AAC25888.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE07146 WBGene00000713 locus:col-140 cuticular collagen status:Confirmed UniProt:Q19813_CAEEL protein_id:AAC25888.1| [wormORF-contam.fasta]
  • Collagen protein 140 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • COLlagen family member (col-140) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE07146 WBGene00000713 locus:col-140 cuticular collagen status:Confirmed UniProt:Q19813 protein_id:AAC25888.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE07146 WBGene00000713 locus:col-140 cuticular collagen status:Confirmed UniProt:Q19813 protein_id:CCD62675.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE07146 WBGene00000713 locus:col-140 status:Confirmed UniProt:Q19813 protein_id:CCD62675.1 [wormpep246-ecoli-contam.fasta]
  • COLlagen OS=Caenorhabditis elegans GN=col-140 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 289 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    Biological Process: phosphate transport [IEALink to PubMed article]
    Molecular Function: structural constituent of cuticle [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKLILVGSS IALTCCLVTV FTMGSLLQEI SDMKMEVEDG MMEFREIHQD TWNRVVRKHI  60
   61 NPTGETDAPP NFQTLFGIRR SRQSGFPEQC NCGPRSEGCP PGPPGTPGEQ GPQGESGPDG 120
  121 DDGKPGLAGE VVAIVHDLPG GCIQCPPGRP GPRGPPGEVG PAGPSGDNGR KGPPGPPGGP 180
  181 GGPGEGGDGG RPGNPGRPGP AGPRGEPGTE YKPGQPGRPG PPGPRGEAGP AGQPGSPGND 240
  241 GESGKPGNAG RPGPPGAPGK NGTPGVRGED AAPGPDAGYC PCPARAYKA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..289] PSI-BLAST 25.69897 No description for 1y0fB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle