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Protein Overview: bir-1

General Information:
Name(s) found: bir-1 / CE06521 [WormBase]
Description(s) found:
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  • WBGene00000249 locus:bir-1 status:Confirmed UniProt:G5EFA2 protein_id:CAA98553.1 [WormBase]
  • pir||T37471 apoptosis inhibitor homolog T27F2.3 - Caenorhabditis elegans [NCBI NR]
  • gi|3880312|emb|CAA98553.1| C. elegans protein T27F2.3, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|2738001|gb|AAB94330.1| inhibitor of apoptosis homolog [Caenorhabditis elegans] [NCBI NR]
  • gi|17564820|ref|NP_505949.1| BIR (baculovirus inhibitory repeat) family member (bir-1) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE06521 WBGene00000249 locus:bir-1 Inhibitor of Apoptosis domain. status:Confirmed TR:Q22837 protein_id:CAA98553.1 [wormpep150.fasta]
  • 06521 WBGene00000249 locus:bir-1 Inhibitor of Apoptosis domain. status:Confirmed TR:Q22837 protein_id:CAA98553.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • baculovirus Inhibitory Repeat family member, survivin (17.7 kD) (bir-1) [Caenorhabditis elegans]gi|3880312|emb|CAA98553.1| Hypothetical protein T27F2.3 [Caenorhabditis elegans]gi|7494532|pir||T37471 apoptosis inhibitor homolog T27F2.3 - Caenorhabditis e [nrdb_11152004_Chlamydomonas]
  • locus:bir-1 Inhibitor of Apoptosis domain. status:Confirmed TR:Q22837 protein_id:CAA98553.1 [wormpep115.fasta.reversed]
  • CE06521 locus:bir-1 Inhibitor of Apoptosis domain. status:Confirmed TR:Q22837 protein_id:CAA98553.1 [wormpep80.hongbin]
  • CE06521 WBGene00000249 locus:bir-1 Inhibitor of Apoptosis domain. status:Confirmed UniProt:Q22837_CAEEL protein_id:CAA98553.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE06521 WBGene00000249 locus:bir-1 Inhibitor of Apoptosis domain. status:Confirmed UniProt:Q22837_CAEEL protein_id:CAA98553.1| [wormORF-contam.fasta]
  • Hypothetical protein T27F2.3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • BIR (baculovirus inhibitory repeat) family member (bir-1) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • inhibitor of apoptosis homolog [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE06521 WBGene00000249 locus:bir-1 Inhibitor of Apoptosis domain. status:Confirmed UniProt:Q22837 protein_id:CAA98553.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE06521 WBGene00000249 locus:bir-1 Inhibitor of Apoptosis domain. status:Confirmed UniProt:G5EFA2 protein_id:CAA98553.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE06521 WBGene00000249 locus:bir-1 status:Confirmed UniProt:G5EFA2 protein_id:CAA98553.1 [wormpep246-ecoli-contam.fasta]
  • BIR (Baculovirus inhibitory repeat) family OS=Caenorhabditis elegans GN=bir-1 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 155 amino acids

    Gene Ontology:
    Cellular Component: condensed chromosome [IDALink to PubMed article]
    spindle midzone [IDALink to PubMed article]
    intracellular [IEALink to PubMed article]
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    anti-apoptosis [IEALink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: zinc ion binding [IEALink to PubMed article]
    transcription regulator activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPGTKKKSD MAKFTFYKDR LMTFKNFEYD RDPDAKCTSQ AVAQAGFYCT GPQSGKCAFC  60
   61 NKELDFDPED DPWYEHTKRD EPCEFVRIGK LDDSELTIND TVRLSQTAMI MTKLFEHEMM 120
  121 INNLSNHSSS DALFDQLKKV PNTASTTKSN SRRGK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..155] PSI-BLAST 29.522879 No description for 2opzA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle